Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC3.84□□□□□ -1.79
Sox3P53784 Gm6900-201ENSMUST00000178971 342 ntBASIC3.84□□□□□ -1.79
Sox3P53784 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC3.84□□□□□ -1.79
Sox3P53784 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC3.84□□□□□ -1.79
Sox3P53784 Mir6996-201ENSMUST00000183922 61 ntBASIC3.84□□□□□ -1.79
Sox3P53784 Gm7634-201ENSMUST00000185778 553 ntBASIC3.84□□□□□ -1.79
Sox3P53784 Gm38061-201ENSMUST00000192490 365 ntBASIC3.84□□□□□ -1.79
Sox3P53784 Gm9722-201ENSMUST00000194568 802 ntBASIC3.84□□□□□ -1.79
Sox3P53784 Gm29747-201ENSMUST00000194764 585 ntBASIC3.84□□□□□ -1.79
Sox3P53784 Ighv8-1-201ENSMUST00000194897 291 ntBASIC3.84□□□□□ -1.79
Sox3P53784 Gm17781-201ENSMUST00000195232 649 ntBASIC3.84□□□□□ -1.79
Sox3P53784 Gm36954-201ENSMUST00000195362 363 ntBASIC3.84□□□□□ -1.79
Sox3P53784 Gm37102-201ENSMUST00000195740 1105 ntBASIC3.84□□□□□ -1.79
Sox3P53784 Gm44548-201ENSMUST00000208929 192 ntBASIC3.84□□□□□ -1.79
Sox3P53784 Gm8679-201ENSMUST00000210651 1036 ntBASIC3.84□□□□□ -1.79
Sox3P53784 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC3.84□□□□□ -1.79
Sox3P53784 AC154738.2-201ENSMUST00000227403 1110 ntBASIC3.84□□□□□ -1.79
Sox3P53784 AC192088.2-201ENSMUST00000227590 411 ntBASIC3.84□□□□□ -1.79
Sox3P53784 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Sox3P53784 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Sox3P53784 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Sox3P53784 Gm43882-201ENSMUST00000204871 2264 ntBASIC3.84□□□□□ -1.79
Sox3P53784 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Sox3P53784 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
Sox3P53784 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC3.83□□□□□ -1.8
Sox3P53784 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Sox3P53784 Gm5379-201ENSMUST00000120973 826 ntBASIC3.83□□□□□ -1.8
Sox3P53784 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC3.83□□□□□ -1.8
Sox3P53784 Gm7846-201ENSMUST00000145844 274 ntBASIC3.83□□□□□ -1.8
Sox3P53784 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC3.83□□□□□ -1.8
Sox3P53784 Gm23215-201ENSMUST00000178153 121 ntBASIC3.83□□□□□ -1.8
Sox3P53784 Gm4479-201ENSMUST00000178807 171 ntBASIC3.83□□□□□ -1.8
Sox3P53784 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Sox3P53784 Gm21960-201ENSMUST00000181924 452 ntBASIC3.83□□□□□ -1.8
Sox3P53784 Gm19200-201ENSMUST00000182579 1001 ntBASIC3.83□□□□□ -1.8
Sox3P53784 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC3.83□□□□□ -1.8
Sox3P53784 Mir6238-201ENSMUST00000184140 129 ntBASIC3.83□□□□□ -1.8
Sox3P53784 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Sox3P53784 Gm37629-201ENSMUST00000193635 1050 ntBASIC3.83□□□□□ -1.8
Sox3P53784 Gm45200-201ENSMUST00000207434 919 ntBASIC3.83□□□□□ -1.8
Sox3P53784 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Sox3P53784 AC153852.1-201ENSMUST00000217881 567 ntBASIC3.83□□□□□ -1.8
Sox3P53784 Gm4263-202ENSMUST00000221392 667 ntBASIC3.83□□□□□ -1.8
Sox3P53784 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC3.83□□□□□ -1.8
Sox3P53784 CT009711.3-201ENSMUST00000225882 250 ntBASIC3.83□□□□□ -1.8
Sox3P53784 AC140368.1-202ENSMUST00000226131 658 ntBASIC3.83□□□□□ -1.8
Sox3P53784 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Sox3P53784 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Sox3P53784 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Sox3P53784 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Sox3P53784 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Sox3P53784 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Sox3P53784 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Sox3P53784 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC3.83□□□□□ -1.8
Sox3P53784 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Sox3P53784 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
Sox3P53784 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Sox3P53784 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Sox3P53784 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.82□□□□□ -1.8
Sox3P53784 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Sox3P53784 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Sox3P53784 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Sox3P53784 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC3.82□□□□□ -1.8
Sox3P53784 Gm12261-201ENSMUST00000117499 645 ntBASIC3.82□□□□□ -1.8
Sox3P53784 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC3.82□□□□□ -1.8
Sox3P53784 Gm9432-201ENSMUST00000117810 759 ntBASIC3.82□□□□□ -1.8
Sox3P53784 Gm12392-201ENSMUST00000118014 938 ntBASIC3.82□□□□□ -1.8
Sox3P53784 Gm15268-201ENSMUST00000118845 352 ntBASIC3.82□□□□□ -1.8
Sox3P53784 Gm5060-201ENSMUST00000120072 599 ntBASIC3.82□□□□□ -1.8
Sox3P53784 Gm11398-201ENSMUST00000120330 320 ntBASIC3.82□□□□□ -1.8
Sox3P53784 Gm14739-201ENSMUST00000120424 802 ntBASIC3.82□□□□□ -1.8
Sox3P53784 Gm14589-201ENSMUST00000121640 727 ntBASIC3.82□□□□□ -1.8
Sox3P53784 Gm15885-201ENSMUST00000122114 388 ntBASIC3.82□□□□□ -1.8
Sox3P53784 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Sox3P53784 Gm26148-201ENSMUST00000157430 68 ntBASIC3.82□□□□□ -1.8
Sox3P53784 Gm25438-201ENSMUST00000158281 110 ntBASIC3.82□□□□□ -1.8
Sox3P53784 Gm25898-201ENSMUST00000158303 106 ntBASIC3.82□□□□□ -1.8
Sox3P53784 Gm16303-201ENSMUST00000161498 390 ntBASIC3.82□□□□□ -1.8
Sox3P53784 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Sox3P53784 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Sox3P53784 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Sox3P53784 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Sox3P53784 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Sox3P53784 Gm27155-201ENSMUST00000183716 898 ntBASIC3.82□□□□□ -1.8
Sox3P53784 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC3.82□□□□□ -1.8
Sox3P53784 Gm29556-201ENSMUST00000187591 696 ntBASIC3.82□□□□□ -1.8
Sox3P53784 Gm37603-201ENSMUST00000192368 219 ntBASIC3.82□□□□□ -1.8
Sox3P53784 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
Sox3P53784 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC3.82□□□□□ -1.8
Sox3P53784 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC3.82□□□□□ -1.8
Sox3P53784 AC132384.13-201ENSMUST00000219556 1159 ntBASIC3.82□□□□□ -1.8
Sox3P53784 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Sox3P53784 Gm7119-201ENSMUST00000221345 695 ntBASIC3.82□□□□□ -1.8
Sox3P53784 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC3.82□□□□□ -1.8
Sox3P53784 AC168059.1-201ENSMUST00000225846 841 ntBASIC3.82□□□□□ -1.8
Sox3P53784 AC117949.2-201ENSMUST00000225900 584 ntBASIC3.82□□□□□ -1.8
Sox3P53784 CT025536.1-201ENSMUST00000226744 844 ntBASIC3.82□□□□□ -1.8
Sox3P53784 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.82□□□□□ -1.8
Sox3P53784 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Sox3P53784 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms