Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Mir6481-201ENSMUST00000184617 110 ntBASIC5.65□□□□□ -1.5
Sox1P53783 Mir3620-201ENSMUST00000184710 61 ntBASIC5.65□□□□□ -1.5
Sox1P53783 Gm28098-201ENSMUST00000191361 699 ntBASIC5.65□□□□□ -1.5
Sox1P53783 Gm37670-201ENSMUST00000193622 229 ntBASIC5.65□□□□□ -1.5
Sox1P53783 Gm37616-201ENSMUST00000193974 322 ntBASIC5.65□□□□□ -1.5
Sox1P53783 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC5.65□□□□□ -1.5
Sox1P53783 Gm42828-201ENSMUST00000199669 469 ntBASIC5.65□□□□□ -1.5
Sox1P53783 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC5.65□□□□□ -1.5
Sox1P53783 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC5.65□□□□□ -1.5
Sox1P53783 Gm8719-201ENSMUST00000203602 534 ntBASIC5.65□□□□□ -1.5
Sox1P53783 Gm45146-201ENSMUST00000207108 221 ntBASIC5.65□□□□□ -1.5
Sox1P53783 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC5.65□□□□□ -1.5
Sox1P53783 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.65□□□□□ -1.5
Sox1P53783 AC137961.1-201ENSMUST00000227924 734 ntBASIC5.65□□□□□ -1.5
Sox1P53783 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Sox1P53783 Gm23875-201ENSMUST00000083711 318 ntBASIC5.65□□□□□ -1.5
Sox1P53783 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC5.65□□□□□ -1.51
Sox1P53783 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Sox1P53783 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Sox1P53783 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Sox1P53783 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.65□□□□□ -1.51
Sox1P53783 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Sox1P53783 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Sox1P53783 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Sox1P53783 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Sox1P53783 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Sox1P53783 Gm14245-201ENSMUST00000118939 1843 ntBASIC5.64□□□□□ -1.51
Sox1P53783 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox1P53783 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox1P53783 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Sox1P53783 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox1P53783 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Sox1P53783 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Sox1P53783 Gm5155-201ENSMUST00000072381 2841 ntBASIC5.64□□□□□ -1.51
Sox1P53783 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox1P53783 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.64□□□□□ -1.51
Sox1P53783 Gm43577-201ENSMUST00000197090 3344 ntBASIC5.64□□□□□ -1.51
Sox1P53783 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
Sox1P53783 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
Sox1P53783 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox1P53783 Gm16431-201ENSMUST00000117454 431 ntBASIC5.64□□□□□ -1.51
Sox1P53783 Gm13085-201ENSMUST00000118356 171 ntBASIC5.64□□□□□ -1.51
Sox1P53783 Gm12115-201ENSMUST00000119969 447 ntBASIC5.64□□□□□ -1.51
Sox1P53783 Gm6591-201ENSMUST00000121063 434 ntBASIC5.64□□□□□ -1.51
Sox1P53783 Gm14129-201ENSMUST00000122436 291 ntBASIC5.64□□□□□ -1.51
Sox1P53783 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox1P53783 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC5.64□□□□□ -1.51
Sox1P53783 Gm24059-201ENSMUST00000157493 312 ntBASIC5.64□□□□□ -1.51
Sox1P53783 Gm25913-201ENSMUST00000157617 135 ntBASIC5.64□□□□□ -1.51
Sox1P53783 Gm16566-201ENSMUST00000160387 910 ntBASIC5.64□□□□□ -1.51
Sox1P53783 Gm10784-201ENSMUST00000178715 238 ntBASIC5.64□□□□□ -1.51
Sox1P53783 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Sox1P53783 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC5.64□□□□□ -1.51
Sox1P53783 Gm27796-201ENSMUST00000183863 261 ntBASIC5.64□□□□□ -1.51
Sox1P53783 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC5.64□□□□□ -1.51
Sox1P53783 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC5.64□□□□□ -1.51
Sox1P53783 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC5.64□□□□□ -1.51
Sox1P53783 Gm5731-201ENSMUST00000190969 481 ntBASIC5.64□□□□□ -1.51
Sox1P53783 Gm18403-201ENSMUST00000192907 529 ntBASIC5.64□□□□□ -1.51
Sox1P53783 Gm43601-201ENSMUST00000196294 945 ntBASIC5.64□□□□□ -1.51
Sox1P53783 Gm43043-201ENSMUST00000196579 412 ntBASIC5.64□□□□□ -1.51
Sox1P53783 Gm43723-201ENSMUST00000196886 189 ntBASIC5.64□□□□□ -1.51
Sox1P53783 Gm5660-201ENSMUST00000197453 1149 ntBASIC5.64□□□□□ -1.51
Sox1P53783 Gm18423-201ENSMUST00000205144 1074 ntBASIC5.64□□□□□ -1.51
Sox1P53783 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC5.64□□□□□ -1.51
Sox1P53783 AC166902.1-201ENSMUST00000216653 517 ntBASIC5.64□□□□□ -1.51
Sox1P53783 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox1P53783 AL589742.1-201ENSMUST00000226034 349 ntBASIC5.64□□□□□ -1.51
Sox1P53783 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Sox1P53783 Gm23972-201ENSMUST00000083322 165 ntBASIC5.64□□□□□ -1.51
Sox1P53783 Gm24029-201ENSMUST00000083928 143 ntBASIC5.64□□□□□ -1.51
Sox1P53783 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox1P53783 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Sox1P53783 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox1P53783 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox1P53783 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Sox1P53783 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox1P53783 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
Sox1P53783 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.64□□□□□ -1.51
Sox1P53783 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Sox1P53783 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sox1P53783 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.63□□□□□ -1.51
Sox1P53783 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sox1P53783 Ankrd55-205ENSMUST00000223871 3209 ntBASIC5.63□□□□□ -1.51
Sox1P53783 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Sox1P53783 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Sox1P53783 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Sox1P53783 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sox1P53783 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sox1P53783 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Sox1P53783 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
Sox1P53783 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Sox1P53783 Gm14517-201ENSMUST00000119040 337 ntBASIC5.63□□□□□ -1.51
Sox1P53783 Gm14656-201ENSMUST00000120342 502 ntBASIC5.63□□□□□ -1.51
Sox1P53783 Gm14761-201ENSMUST00000121363 262 ntBASIC5.63□□□□□ -1.51
Sox1P53783 Gm14972-201ENSMUST00000121780 364 ntBASIC5.63□□□□□ -1.51
Sox1P53783 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC5.63□□□□□ -1.51
Sox1P53783 Gm26256-201ENSMUST00000122499 186 ntBASIC5.63□□□□□ -1.51
Sox1P53783 Defb44-ps-201ENSMUST00000126871 219 ntBASIC5.63□□□□□ -1.51
Sox1P53783 Gm24735-201ENSMUST00000158859 118 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms