Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
H2afb3S4R1G7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
H2afb3S4R1G7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
H2afb3S4R1G7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
H2afb3S4R1G7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
H2afb3S4R1G7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
H2afb3S4R1G7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
H2afb3S4R1G7 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
H2afb3S4R1G7 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb3S4R1G7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb3S4R1G7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb3S4R1G7 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb3S4R1G7 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb3S4R1G7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb3S4R1G7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.67■□□□□ 0.1
H2afb3S4R1G7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb3S4R1G7 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.67■□□□□ 0.1
H2afb3S4R1G7 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb3S4R1G7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb3S4R1G7 Gm27405-201ENSMUST00000184201 112 ntBASIC15.67■□□□□ 0.1
H2afb3S4R1G7 Gm29791-202ENSMUST00000207888 369 ntBASIC15.67■□□□□ 0.1
H2afb3S4R1G7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.67■□□□□ 0.1
H2afb3S4R1G7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
H2afb3S4R1G7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb3S4R1G7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb3S4R1G7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb3S4R1G7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb3S4R1G7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb3S4R1G7 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb3S4R1G7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb3S4R1G7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
H2afb3S4R1G7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb3S4R1G7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb3S4R1G7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb3S4R1G7 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb3S4R1G7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb3S4R1G7 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb3S4R1G7 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb3S4R1G7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
H2afb3S4R1G7 Rab3c-203ENSMUST00000224180 967 ntBASIC15.66■□□□□ 0.1
H2afb3S4R1G7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb3S4R1G7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb3S4R1G7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb3S4R1G7 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb3S4R1G7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb3S4R1G7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb3S4R1G7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb3S4R1G7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb3S4R1G7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb3S4R1G7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb3S4R1G7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb3S4R1G7 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb3S4R1G7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb3S4R1G7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb3S4R1G7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb3S4R1G7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.65■□□□□ 0.1
H2afb3S4R1G7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.65■□□□□ 0.1
H2afb3S4R1G7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb3S4R1G7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb3S4R1G7 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
H2afb3S4R1G7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb3S4R1G7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb3S4R1G7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
H2afb3S4R1G7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb3S4R1G7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb3S4R1G7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb3S4R1G7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb3S4R1G7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb3S4R1G7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb3S4R1G7 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb3S4R1G7 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb3S4R1G7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb3S4R1G7 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.64■□□□□ 0.09
H2afb3S4R1G7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb3S4R1G7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
H2afb3S4R1G7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb3S4R1G7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
H2afb3S4R1G7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb3S4R1G7 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb3S4R1G7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
H2afb3S4R1G7 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb3S4R1G7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb3S4R1G7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.64■□□□□ 0.09
H2afb3S4R1G7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb3S4R1G7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.64■□□□□ 0.09
H2afb3S4R1G7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.64■□□□□ 0.09
H2afb3S4R1G7 Gm26524-201ENSMUST00000192339 390 ntBASIC15.64■□□□□ 0.09
H2afb3S4R1G7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
H2afb3S4R1G7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
H2afb3S4R1G7 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb3S4R1G7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb3S4R1G7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb3S4R1G7 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb3S4R1G7 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.64■□□□□ 0.09
H2afb3S4R1G7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb3S4R1G7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb3S4R1G7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb3S4R1G7 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.64■□□□□ 0.09
H2afb3S4R1G7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb3S4R1G7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms