Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hmg20bQ9Z104 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hmg20bQ9Z104 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmg20bQ9Z104 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmg20bQ9Z104 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hmg20bQ9Z104 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmg20bQ9Z104 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hmg20bQ9Z104 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Hmg20bQ9Z104 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hmg20bQ9Z104 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hmg20bQ9Z104 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hmg20bQ9Z104 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.54■□□□□ 0.88
Hmg20bQ9Z104 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hmg20bQ9Z104 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hmg20bQ9Z104 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.54■□□□□ 0.88
Hmg20bQ9Z104 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.54■□□□□ 0.88
Hmg20bQ9Z104 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hmg20bQ9Z104 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Hmg20bQ9Z104 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hmg20bQ9Z104 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Hmg20bQ9Z104 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hmg20bQ9Z104 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.54■□□□□ 0.88
Hmg20bQ9Z104 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hmg20bQ9Z104 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.54■□□□□ 0.88
Hmg20bQ9Z104 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hmg20bQ9Z104 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hmg20bQ9Z104 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hmg20bQ9Z104 Gm8520-201ENSMUST00000186517 868 ntBASIC20.53■□□□□ 0.88
Hmg20bQ9Z104 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hmg20bQ9Z104 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hmg20bQ9Z104 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hmg20bQ9Z104 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Hmg20bQ9Z104 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hmg20bQ9Z104 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hmg20bQ9Z104 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hmg20bQ9Z104 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Hmg20bQ9Z104 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmg20bQ9Z104 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmg20bQ9Z104 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmg20bQ9Z104 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmg20bQ9Z104 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Hmg20bQ9Z104 Gm24841-201ENSMUST00000158676 357 ntBASIC20.52■□□□□ 0.88
Hmg20bQ9Z104 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hmg20bQ9Z104 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmg20bQ9Z104 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmg20bQ9Z104 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmg20bQ9Z104 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmg20bQ9Z104 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Hmg20bQ9Z104 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmg20bQ9Z104 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hmg20bQ9Z104 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Hmg20bQ9Z104 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmg20bQ9Z104 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmg20bQ9Z104 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hmg20bQ9Z104 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Hmg20bQ9Z104 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hmg20bQ9Z104 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.51■□□□□ 0.87
Hmg20bQ9Z104 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hmg20bQ9Z104 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hmg20bQ9Z104 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Hmg20bQ9Z104 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmg20bQ9Z104 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.51■□□□□ 0.87
Hmg20bQ9Z104 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmg20bQ9Z104 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hmg20bQ9Z104 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hmg20bQ9Z104 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.5■□□□□ 0.87
Hmg20bQ9Z104 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmg20bQ9Z104 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmg20bQ9Z104 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hmg20bQ9Z104 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Hmg20bQ9Z104 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hmg20bQ9Z104 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Hmg20bQ9Z104 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmg20bQ9Z104 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.5■□□□□ 0.87
Hmg20bQ9Z104 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hmg20bQ9Z104 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Hmg20bQ9Z104 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmg20bQ9Z104 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hmg20bQ9Z104 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmg20bQ9Z104 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmg20bQ9Z104 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmg20bQ9Z104 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmg20bQ9Z104 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmg20bQ9Z104 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.49■□□□□ 0.87
Hmg20bQ9Z104 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.49■□□□□ 0.87
Hmg20bQ9Z104 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.49■□□□□ 0.87
Hmg20bQ9Z104 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Hmg20bQ9Z104 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmg20bQ9Z104 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmg20bQ9Z104 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.49■□□□□ 0.87
Hmg20bQ9Z104 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmg20bQ9Z104 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmg20bQ9Z104 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmg20bQ9Z104 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmg20bQ9Z104 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmg20bQ9Z104 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.48■□□□□ 0.87
Hmg20bQ9Z104 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Hmg20bQ9Z104 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Hmg20bQ9Z104 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmg20bQ9Z104 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms