Protein–RNA interactions for Protein: Q9WU72

Tnfsf13b, Tumor necrosis factor ligand superfamily member 13B, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf13bQ9WU72 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfsf13bQ9WU72 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfsf13bQ9WU72 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfsf13bQ9WU72 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfsf13bQ9WU72 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfsf13bQ9WU72 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfsf13bQ9WU72 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.85■□□□□ 0.61
Tnfsf13bQ9WU72 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfsf13bQ9WU72 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfsf13bQ9WU72 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfsf13bQ9WU72 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Tnfsf13bQ9WU72 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfsf13bQ9WU72 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.84■□□□□ 0.61
Tnfsf13bQ9WU72 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.84■□□□□ 0.61
Tnfsf13bQ9WU72 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfsf13bQ9WU72 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfsf13bQ9WU72 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfsf13bQ9WU72 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfsf13bQ9WU72 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.84■□□□□ 0.61
Tnfsf13bQ9WU72 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfsf13bQ9WU72 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfsf13bQ9WU72 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfsf13bQ9WU72 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.83■□□□□ 0.61
Tnfsf13bQ9WU72 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
Tnfsf13bQ9WU72 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tnfsf13bQ9WU72 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfsf13bQ9WU72 Gm10013-201ENSMUST00000106074 672 ntBASIC18.83■□□□□ 0.6
Tnfsf13bQ9WU72 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfsf13bQ9WU72 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.83■□□□□ 0.6
Tnfsf13bQ9WU72 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfsf13bQ9WU72 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.83■□□□□ 0.6
Tnfsf13bQ9WU72 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfsf13bQ9WU72 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfsf13bQ9WU72 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfsf13bQ9WU72 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfsf13bQ9WU72 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.82■□□□□ 0.6
Tnfsf13bQ9WU72 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfsf13bQ9WU72 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfsf13bQ9WU72 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Tnfsf13bQ9WU72 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfsf13bQ9WU72 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfsf13bQ9WU72 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfsf13bQ9WU72 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.82■□□□□ 0.6
Tnfsf13bQ9WU72 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Tnfsf13bQ9WU72 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfsf13bQ9WU72 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfsf13bQ9WU72 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfsf13bQ9WU72 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfsf13bQ9WU72 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Tnfsf13bQ9WU72 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfsf13bQ9WU72 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfsf13bQ9WU72 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfsf13bQ9WU72 Gm22697-201ENSMUST00000175194 63 ntBASIC18.81■□□□□ 0.6
Tnfsf13bQ9WU72 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.81■□□□□ 0.6
Tnfsf13bQ9WU72 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfsf13bQ9WU72 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfsf13bQ9WU72 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfsf13bQ9WU72 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Tnfsf13bQ9WU72 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfsf13bQ9WU72 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfsf13bQ9WU72 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfsf13bQ9WU72 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfsf13bQ9WU72 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
Tnfsf13bQ9WU72 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfsf13bQ9WU72 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Tnfsf13bQ9WU72 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfsf13bQ9WU72 Gm18101-201ENSMUST00000215769 548 ntBASIC18.8■□□□□ 0.6
Tnfsf13bQ9WU72 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfsf13bQ9WU72 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfsf13bQ9WU72 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfsf13bQ9WU72 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfsf13bQ9WU72 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.79■□□□□ 0.6
Tnfsf13bQ9WU72 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfsf13bQ9WU72 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Tnfsf13bQ9WU72 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Tnfsf13bQ9WU72 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfsf13bQ9WU72 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.79■□□□□ 0.6
Tnfsf13bQ9WU72 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.79■□□□□ 0.6
Tnfsf13bQ9WU72 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Tnfsf13bQ9WU72 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Tnfsf13bQ9WU72 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfsf13bQ9WU72 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfsf13bQ9WU72 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfsf13bQ9WU72 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfsf13bQ9WU72 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.78■□□□□ 0.6
Tnfsf13bQ9WU72 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.78■□□□□ 0.6
Tnfsf13bQ9WU72 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfsf13bQ9WU72 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfsf13bQ9WU72 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfsf13bQ9WU72 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfsf13bQ9WU72 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfsf13bQ9WU72 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Tnfsf13bQ9WU72 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfsf13bQ9WU72 Mir1668-201ENSMUST00000184114 107 ntBASIC18.78■□□□□ 0.6
Tnfsf13bQ9WU72 Gm8969-201ENSMUST00000199694 526 ntBASIC18.78■□□□□ 0.6
Tnfsf13bQ9WU72 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfsf13bQ9WU72 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfsf13bQ9WU72 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Tnfsf13bQ9WU72 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfsf13bQ9WU72 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms