Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col13a1Q9R1N9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col13a1Q9R1N9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col13a1Q9R1N9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col13a1Q9R1N9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col13a1Q9R1N9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col13a1Q9R1N9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col13a1Q9R1N9 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.78□□□□□ -0.04
Col13a1Q9R1N9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Col13a1Q9R1N9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Col13a1Q9R1N9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Col13a1Q9R1N9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col13a1Q9R1N9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col13a1Q9R1N9 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.78□□□□□ -0.04
Col13a1Q9R1N9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col13a1Q9R1N9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Col13a1Q9R1N9 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.77□□□□□ -0.04
Col13a1Q9R1N9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.77□□□□□ -0.04
Col13a1Q9R1N9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Col13a1Q9R1N9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col13a1Q9R1N9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.77□□□□□ -0.05
Col13a1Q9R1N9 Gm38027-201ENSMUST00000192315 235 ntBASIC14.77□□□□□ -0.05
Col13a1Q9R1N9 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.77□□□□□ -0.05
Col13a1Q9R1N9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.77□□□□□ -0.05
Col13a1Q9R1N9 Gm18669-201ENSMUST00000216049 778 ntBASIC14.77□□□□□ -0.05
Col13a1Q9R1N9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col13a1Q9R1N9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col13a1Q9R1N9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Col13a1Q9R1N9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Col13a1Q9R1N9 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.77□□□□□ -0.05
Col13a1Q9R1N9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.77□□□□□ -0.05
Col13a1Q9R1N9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col13a1Q9R1N9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col13a1Q9R1N9 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Col13a1Q9R1N9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col13a1Q9R1N9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col13a1Q9R1N9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col13a1Q9R1N9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col13a1Q9R1N9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col13a1Q9R1N9 Gm43514-201ENSMUST00000198852 424 ntBASIC14.76□□□□□ -0.05
Col13a1Q9R1N9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.76□□□□□ -0.05
Col13a1Q9R1N9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col13a1Q9R1N9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col13a1Q9R1N9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col13a1Q9R1N9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col13a1Q9R1N9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col13a1Q9R1N9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col13a1Q9R1N9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col13a1Q9R1N9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col13a1Q9R1N9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.76□□□□□ -0.05
Col13a1Q9R1N9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col13a1Q9R1N9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Col13a1Q9R1N9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Col13a1Q9R1N9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col13a1Q9R1N9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Col13a1Q9R1N9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col13a1Q9R1N9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Col13a1Q9R1N9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col13a1Q9R1N9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col13a1Q9R1N9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col13a1Q9R1N9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col13a1Q9R1N9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col13a1Q9R1N9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col13a1Q9R1N9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col13a1Q9R1N9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.75□□□□□ -0.05
Col13a1Q9R1N9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Col13a1Q9R1N9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.75□□□□□ -0.05
Col13a1Q9R1N9 Gm29518-201ENSMUST00000190858 372 ntBASIC14.75□□□□□ -0.05
Col13a1Q9R1N9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.75□□□□□ -0.05
Col13a1Q9R1N9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col13a1Q9R1N9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.75□□□□□ -0.05
Col13a1Q9R1N9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col13a1Q9R1N9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col13a1Q9R1N9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col13a1Q9R1N9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Col13a1Q9R1N9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Col13a1Q9R1N9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.75□□□□□ -0.05
Col13a1Q9R1N9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col13a1Q9R1N9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col13a1Q9R1N9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col13a1Q9R1N9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col13a1Q9R1N9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col13a1Q9R1N9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col13a1Q9R1N9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col13a1Q9R1N9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col13a1Q9R1N9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col13a1Q9R1N9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col13a1Q9R1N9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col13a1Q9R1N9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col13a1Q9R1N9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col13a1Q9R1N9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col13a1Q9R1N9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col13a1Q9R1N9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.74□□□□□ -0.05
Col13a1Q9R1N9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Col13a1Q9R1N9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col13a1Q9R1N9 Gm6443-201ENSMUST00000203599 874 ntBASIC14.74□□□□□ -0.05
Col13a1Q9R1N9 Gm5587-201ENSMUST00000206270 674 ntBASIC14.74□□□□□ -0.05
Col13a1Q9R1N9 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col13a1Q9R1N9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col13a1Q9R1N9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms