Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.15■□□□□ 0.66
Prpf40aQ9R1C7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf40aQ9R1C7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf40aQ9R1C7 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf40aQ9R1C7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf40aQ9R1C7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf40aQ9R1C7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.15■□□□□ 0.66
Prpf40aQ9R1C7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Prpf40aQ9R1C7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Prpf40aQ9R1C7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Prpf40aQ9R1C7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Prpf40aQ9R1C7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Prpf40aQ9R1C7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf40aQ9R1C7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf40aQ9R1C7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf40aQ9R1C7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.14■□□□□ 0.65
Prpf40aQ9R1C7 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.14■□□□□ 0.65
Prpf40aQ9R1C7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf40aQ9R1C7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf40aQ9R1C7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.14■□□□□ 0.65
Prpf40aQ9R1C7 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf40aQ9R1C7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Prpf40aQ9R1C7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf40aQ9R1C7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf40aQ9R1C7 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.13■□□□□ 0.65
Prpf40aQ9R1C7 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.13■□□□□ 0.65
Prpf40aQ9R1C7 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf40aQ9R1C7 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf40aQ9R1C7 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf40aQ9R1C7 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.13■□□□□ 0.65
Prpf40aQ9R1C7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf40aQ9R1C7 Gm15378-201ENSMUST00000121894 207 ntBASIC19.13■□□□□ 0.65
Prpf40aQ9R1C7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.13■□□□□ 0.65
Prpf40aQ9R1C7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf40aQ9R1C7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf40aQ9R1C7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf40aQ9R1C7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf40aQ9R1C7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Prpf40aQ9R1C7 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf40aQ9R1C7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf40aQ9R1C7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf40aQ9R1C7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf40aQ9R1C7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf40aQ9R1C7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Prpf40aQ9R1C7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf40aQ9R1C7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.12■□□□□ 0.65
Prpf40aQ9R1C7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.12■□□□□ 0.65
Prpf40aQ9R1C7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf40aQ9R1C7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Prpf40aQ9R1C7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Prpf40aQ9R1C7 Gm11643-201ENSMUST00000119578 864 ntBASIC19.12■□□□□ 0.65
Prpf40aQ9R1C7 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf40aQ9R1C7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf40aQ9R1C7 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf40aQ9R1C7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf40aQ9R1C7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.12■□□□□ 0.65
Prpf40aQ9R1C7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf40aQ9R1C7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf40aQ9R1C7 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf40aQ9R1C7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf40aQ9R1C7 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf40aQ9R1C7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Prpf40aQ9R1C7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
Prpf40aQ9R1C7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Prpf40aQ9R1C7 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Prpf40aQ9R1C7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf40aQ9R1C7 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf40aQ9R1C7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.11■□□□□ 0.65
Prpf40aQ9R1C7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.11■□□□□ 0.65
Prpf40aQ9R1C7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Prpf40aQ9R1C7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf40aQ9R1C7 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf40aQ9R1C7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.11■□□□□ 0.65
Prpf40aQ9R1C7 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Prpf40aQ9R1C7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Prpf40aQ9R1C7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf40aQ9R1C7 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Prpf40aQ9R1C7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf40aQ9R1C7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf40aQ9R1C7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Prpf40aQ9R1C7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf40aQ9R1C7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Prpf40aQ9R1C7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf40aQ9R1C7 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf40aQ9R1C7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Prpf40aQ9R1C7 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf40aQ9R1C7 Gm22240-201ENSMUST00000175225 82 ntBASIC19.1■□□□□ 0.65
Prpf40aQ9R1C7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf40aQ9R1C7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.1■□□□□ 0.65
Prpf40aQ9R1C7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.1■□□□□ 0.65
Prpf40aQ9R1C7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Prpf40aQ9R1C7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf40aQ9R1C7 Gm18025-201ENSMUST00000221733 862 ntBASIC19.1■□□□□ 0.65
Prpf40aQ9R1C7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf40aQ9R1C7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf40aQ9R1C7 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.1■□□□□ 0.65
Prpf40aQ9R1C7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf40aQ9R1C7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Prpf40aQ9R1C7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Prpf40aQ9R1C7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms