Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Col4a4Q9QZR9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a4Q9QZR9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a4Q9QZR9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a4Q9QZR9 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.52■□□□□ 0.39
Col4a4Q9QZR9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col4a4Q9QZR9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col4a4Q9QZR9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Col4a4Q9QZR9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.52■□□□□ 0.39
Col4a4Q9QZR9 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col4a4Q9QZR9 Gm6376-201ENSMUST00000209407 580 ntBASIC17.52■□□□□ 0.39
Col4a4Q9QZR9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.52■□□□□ 0.39
Col4a4Q9QZR9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col4a4Q9QZR9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col4a4Q9QZR9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a4Q9QZR9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a4Q9QZR9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a4Q9QZR9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a4Q9QZR9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Col4a4Q9QZR9 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.51■□□□□ 0.39
Col4a4Q9QZR9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a4Q9QZR9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a4Q9QZR9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a4Q9QZR9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
Col4a4Q9QZR9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a4Q9QZR9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a4Q9QZR9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Col4a4Q9QZR9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a4Q9QZR9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a4Q9QZR9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a4Q9QZR9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.51■□□□□ 0.39
Col4a4Q9QZR9 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.51■□□□□ 0.39
Col4a4Q9QZR9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a4Q9QZR9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a4Q9QZR9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Col4a4Q9QZR9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a4Q9QZR9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a4Q9QZR9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.51■□□□□ 0.39
Col4a4Q9QZR9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a4Q9QZR9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a4Q9QZR9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a4Q9QZR9 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a4Q9QZR9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a4Q9QZR9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a4Q9QZR9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a4Q9QZR9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a4Q9QZR9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a4Q9QZR9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.5■□□□□ 0.39
Col4a4Q9QZR9 Gm27000-201ENSMUST00000182943 842 ntBASIC17.5■□□□□ 0.39
Col4a4Q9QZR9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.5■□□□□ 0.39
Col4a4Q9QZR9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.5■□□□□ 0.39
Col4a4Q9QZR9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a4Q9QZR9 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a4Q9QZR9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a4Q9QZR9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a4Q9QZR9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col4a4Q9QZR9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a4Q9QZR9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a4Q9QZR9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a4Q9QZR9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a4Q9QZR9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Col4a4Q9QZR9 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.49■□□□□ 0.39
Col4a4Q9QZR9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Col4a4Q9QZR9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a4Q9QZR9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a4Q9QZR9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a4Q9QZR9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a4Q9QZR9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Col4a4Q9QZR9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Col4a4Q9QZR9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a4Q9QZR9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a4Q9QZR9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a4Q9QZR9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a4Q9QZR9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a4Q9QZR9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Col4a4Q9QZR9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a4Q9QZR9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col4a4Q9QZR9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.49■□□□□ 0.39
Col4a4Q9QZR9 Gm23935-201ENSMUST00000102303 57 ntBASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Gm24270-201ENSMUST00000102326 57 ntBASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Gm7862-201ENSMUST00000121461 292 ntBASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Gm24245-201ENSMUST00000157318 57 ntBASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Gm18421-201ENSMUST00000204122 625 ntBASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Gm15165-201ENSMUST00000118140 502 ntBASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col4a4Q9QZR9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms