Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Msh5Q9QUM7 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.77■□□□□ 0.44
Msh5Q9QUM7 Gm2399-201ENSMUST00000104944 225 ntBASIC17.77■□□□□ 0.44
Msh5Q9QUM7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Msh5Q9QUM7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Msh5Q9QUM7 Gm12441-201ENSMUST00000121806 588 ntBASIC17.77■□□□□ 0.44
Msh5Q9QUM7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.77■□□□□ 0.44
Msh5Q9QUM7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Msh5Q9QUM7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Msh5Q9QUM7 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.77■□□□□ 0.44
Msh5Q9QUM7 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.77■□□□□ 0.44
Msh5Q9QUM7 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Msh5Q9QUM7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Msh5Q9QUM7 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Msh5Q9QUM7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Msh5Q9QUM7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Msh5Q9QUM7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.77■□□□□ 0.43
Msh5Q9QUM7 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Msh5Q9QUM7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh5Q9QUM7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Msh5Q9QUM7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh5Q9QUM7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh5Q9QUM7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh5Q9QUM7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Msh5Q9QUM7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.76■□□□□ 0.43
Msh5Q9QUM7 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.76■□□□□ 0.43
Msh5Q9QUM7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Msh5Q9QUM7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Msh5Q9QUM7 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh5Q9QUM7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh5Q9QUM7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Msh5Q9QUM7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh5Q9QUM7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh5Q9QUM7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.76■□□□□ 0.43
Msh5Q9QUM7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh5Q9QUM7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msh5Q9QUM7 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.75■□□□□ 0.43
Msh5Q9QUM7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh5Q9QUM7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.75■□□□□ 0.43
Msh5Q9QUM7 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh5Q9QUM7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.75■□□□□ 0.43
Msh5Q9QUM7 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh5Q9QUM7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh5Q9QUM7 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh5Q9QUM7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.75■□□□□ 0.43
Msh5Q9QUM7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.75■□□□□ 0.43
Msh5Q9QUM7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Msh5Q9QUM7 AC132260.2-201ENSMUST00000224482 344 ntBASIC17.75■□□□□ 0.43
Msh5Q9QUM7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Msh5Q9QUM7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Msh5Q9QUM7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Msh5Q9QUM7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Msh5Q9QUM7 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh5Q9QUM7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh5Q9QUM7 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh5Q9QUM7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Msh5Q9QUM7 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh5Q9QUM7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Msh5Q9QUM7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh5Q9QUM7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Msh5Q9QUM7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh5Q9QUM7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh5Q9QUM7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh5Q9QUM7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh5Q9QUM7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Msh5Q9QUM7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh5Q9QUM7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh5Q9QUM7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.74■□□□□ 0.43
Msh5Q9QUM7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.74■□□□□ 0.43
Msh5Q9QUM7 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC17.74■□□□□ 0.43
Msh5Q9QUM7 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.74■□□□□ 0.43
Msh5Q9QUM7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh5Q9QUM7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Msh5Q9QUM7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh5Q9QUM7 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh5Q9QUM7 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Msh5Q9QUM7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh5Q9QUM7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Msh5Q9QUM7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh5Q9QUM7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh5Q9QUM7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Msh5Q9QUM7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Msh5Q9QUM7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.74■□□□□ 0.43
Msh5Q9QUM7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Msh5Q9QUM7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh5Q9QUM7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh5Q9QUM7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Msh5Q9QUM7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Msh5Q9QUM7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.73■□□□□ 0.43
Msh5Q9QUM7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh5Q9QUM7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh5Q9QUM7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh5Q9QUM7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh5Q9QUM7 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh5Q9QUM7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Msh5Q9QUM7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Msh5Q9QUM7 Gm38230-201ENSMUST00000193572 1159 ntBASIC17.73■□□□□ 0.43
Msh5Q9QUM7 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC17.73■□□□□ 0.43
Msh5Q9QUM7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.73■□□□□ 0.43
Msh5Q9QUM7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms