Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx5Q9JL61 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.41■□□□□ 0.54
Rfx5Q9JL61 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx5Q9JL61 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx5Q9JL61 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.4■□□□□ 0.54
Rfx5Q9JL61 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx5Q9JL61 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx5Q9JL61 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Rfx5Q9JL61 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.4■□□□□ 0.54
Rfx5Q9JL61 Gm11539-201ENSMUST00000119837 557 ntBASIC18.4■□□□□ 0.54
Rfx5Q9JL61 Gm13436-201ENSMUST00000120418 567 ntBASIC18.4■□□□□ 0.54
Rfx5Q9JL61 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.4■□□□□ 0.54
Rfx5Q9JL61 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx5Q9JL61 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Rfx5Q9JL61 Gm37025-201ENSMUST00000195159 829 ntBASIC18.4■□□□□ 0.54
Rfx5Q9JL61 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Rfx5Q9JL61 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx5Q9JL61 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx5Q9JL61 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Rfx5Q9JL61 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.39■□□□□ 0.54
Rfx5Q9JL61 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
Rfx5Q9JL61 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx5Q9JL61 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Rfx5Q9JL61 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Rfx5Q9JL61 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx5Q9JL61 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rfx5Q9JL61 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx5Q9JL61 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.39■□□□□ 0.53
Rfx5Q9JL61 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.39■□□□□ 0.53
Rfx5Q9JL61 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.39■□□□□ 0.53
Rfx5Q9JL61 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx5Q9JL61 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx5Q9JL61 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.39■□□□□ 0.53
Rfx5Q9JL61 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx5Q9JL61 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx5Q9JL61 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx5Q9JL61 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx5Q9JL61 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.39■□□□□ 0.53
Rfx5Q9JL61 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx5Q9JL61 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx5Q9JL61 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx5Q9JL61 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx5Q9JL61 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rfx5Q9JL61 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Rfx5Q9JL61 Gm13559-201ENSMUST00000120476 863 ntBASIC18.38■□□□□ 0.53
Rfx5Q9JL61 Gm17661-201ENSMUST00000170317 270 ntBASIC18.38■□□□□ 0.53
Rfx5Q9JL61 Gm43799-201ENSMUST00000201845 579 ntBASIC18.38■□□□□ 0.53
Rfx5Q9JL61 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx5Q9JL61 Gm7791-201ENSMUST00000219066 539 ntBASIC18.38■□□□□ 0.53
Rfx5Q9JL61 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx5Q9JL61 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx5Q9JL61 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
Rfx5Q9JL61 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx5Q9JL61 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Rfx5Q9JL61 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.38■□□□□ 0.53
Rfx5Q9JL61 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx5Q9JL61 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx5Q9JL61 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx5Q9JL61 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx5Q9JL61 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.38■□□□□ 0.53
Rfx5Q9JL61 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx5Q9JL61 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx5Q9JL61 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx5Q9JL61 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.37■□□□□ 0.53
Rfx5Q9JL61 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.37■□□□□ 0.53
Rfx5Q9JL61 Gm9731-201ENSMUST00000209480 747 ntBASIC18.37■□□□□ 0.53
Rfx5Q9JL61 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx5Q9JL61 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.37■□□□□ 0.53
Rfx5Q9JL61 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx5Q9JL61 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx5Q9JL61 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx5Q9JL61 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rfx5Q9JL61 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx5Q9JL61 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx5Q9JL61 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx5Q9JL61 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx5Q9JL61 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx5Q9JL61 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rfx5Q9JL61 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.36■□□□□ 0.53
Rfx5Q9JL61 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx5Q9JL61 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx5Q9JL61 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx5Q9JL61 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Rfx5Q9JL61 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx5Q9JL61 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx5Q9JL61 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rfx5Q9JL61 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rfx5Q9JL61 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx5Q9JL61 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx5Q9JL61 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx5Q9JL61 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rfx5Q9JL61 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx5Q9JL61 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx5Q9JL61 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.35■□□□□ 0.53
Rfx5Q9JL61 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx5Q9JL61 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.35■□□□□ 0.53
Rfx5Q9JL61 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx5Q9JL61 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.35■□□□□ 0.53
Rfx5Q9JL61 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rfx5Q9JL61 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms