Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.3■□□□□ 0.36
Tubb3Q9ERD7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tubb3Q9ERD7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tubb3Q9ERD7 Haglr-201ENSMUST00000100000 2085 ntBASIC17.3■□□□□ 0.36
Tubb3Q9ERD7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tubb3Q9ERD7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Tubb3Q9ERD7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tubb3Q9ERD7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Tubb3Q9ERD7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tubb3Q9ERD7 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tubb3Q9ERD7 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tubb3Q9ERD7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.29■□□□□ 0.36
Tubb3Q9ERD7 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tubb3Q9ERD7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tubb3Q9ERD7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.29■□□□□ 0.36
Tubb3Q9ERD7 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.29■□□□□ 0.36
Tubb3Q9ERD7 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tubb3Q9ERD7 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tubb3Q9ERD7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tubb3Q9ERD7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Tubb3Q9ERD7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tubb3Q9ERD7 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.29■□□□□ 0.36
Tubb3Q9ERD7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tubb3Q9ERD7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tubb3Q9ERD7 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tubb3Q9ERD7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Tubb3Q9ERD7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tubb3Q9ERD7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tubb3Q9ERD7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tubb3Q9ERD7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tubb3Q9ERD7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tubb3Q9ERD7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tubb3Q9ERD7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tubb3Q9ERD7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tubb3Q9ERD7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.28■□□□□ 0.36
Tubb3Q9ERD7 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tubb3Q9ERD7 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tubb3Q9ERD7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Tubb3Q9ERD7 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tubb3Q9ERD7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Tubb3Q9ERD7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tubb3Q9ERD7 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tubb3Q9ERD7 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tubb3Q9ERD7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tubb3Q9ERD7 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tubb3Q9ERD7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Tubb3Q9ERD7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tubb3Q9ERD7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tubb3Q9ERD7 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Tubb3Q9ERD7 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Tubb3Q9ERD7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tubb3Q9ERD7 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tubb3Q9ERD7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tubb3Q9ERD7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tubb3Q9ERD7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tubb3Q9ERD7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Tubb3Q9ERD7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tubb3Q9ERD7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tubb3Q9ERD7 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tubb3Q9ERD7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tubb3Q9ERD7 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tubb3Q9ERD7 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tubb3Q9ERD7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tubb3Q9ERD7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.27■□□□□ 0.36
Tubb3Q9ERD7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.27■□□□□ 0.36
Tubb3Q9ERD7 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tubb3Q9ERD7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Tubb3Q9ERD7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tubb3Q9ERD7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tubb3Q9ERD7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Tubb3Q9ERD7 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tubb3Q9ERD7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tubb3Q9ERD7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tubb3Q9ERD7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tubb3Q9ERD7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tubb3Q9ERD7 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.26■□□□□ 0.35
Tubb3Q9ERD7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tubb3Q9ERD7 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tubb3Q9ERD7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tubb3Q9ERD7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Tubb3Q9ERD7 Gm11927-201ENSMUST00000118472 759 ntBASIC17.26■□□□□ 0.35
Tubb3Q9ERD7 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tubb3Q9ERD7 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tubb3Q9ERD7 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tubb3Q9ERD7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tubb3Q9ERD7 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Tubb3Q9ERD7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tubb3Q9ERD7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tubb3Q9ERD7 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tubb3Q9ERD7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tubb3Q9ERD7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tubb3Q9ERD7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Tubb3Q9ERD7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tubb3Q9ERD7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tubb3Q9ERD7 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.25■□□□□ 0.35
Tubb3Q9ERD7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tubb3Q9ERD7 Gm15378-201ENSMUST00000121894 207 ntBASIC17.25■□□□□ 0.35
Tubb3Q9ERD7 Gm6576-201ENSMUST00000169678 883 ntBASIC17.25■□□□□ 0.35
Tubb3Q9ERD7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tubb3Q9ERD7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms