Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rtp4Q9ER80 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtp4Q9ER80 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtp4Q9ER80 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.31■□□□□ 0.2
Rtp4Q9ER80 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtp4Q9ER80 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rtp4Q9ER80 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtp4Q9ER80 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtp4Q9ER80 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rtp4Q9ER80 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rtp4Q9ER80 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rtp4Q9ER80 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.31■□□□□ 0.2
Rtp4Q9ER80 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Rtp4Q9ER80 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rtp4Q9ER80 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rtp4Q9ER80 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rtp4Q9ER80 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rtp4Q9ER80 Gm5417-201ENSMUST00000079706 384 ntBASIC16.31■□□□□ 0.2
Rtp4Q9ER80 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Rtp4Q9ER80 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtp4Q9ER80 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rtp4Q9ER80 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rtp4Q9ER80 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rtp4Q9ER80 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtp4Q9ER80 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtp4Q9ER80 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtp4Q9ER80 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtp4Q9ER80 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtp4Q9ER80 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.3■□□□□ 0.2
Rtp4Q9ER80 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
Rtp4Q9ER80 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtp4Q9ER80 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtp4Q9ER80 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtp4Q9ER80 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtp4Q9ER80 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.3■□□□□ 0.2
Rtp4Q9ER80 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rtp4Q9ER80 Gm37292-201ENSMUST00000192062 758 ntBASIC16.3■□□□□ 0.2
Rtp4Q9ER80 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtp4Q9ER80 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rtp4Q9ER80 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtp4Q9ER80 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rtp4Q9ER80 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rtp4Q9ER80 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rtp4Q9ER80 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rtp4Q9ER80 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtp4Q9ER80 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rtp4Q9ER80 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtp4Q9ER80 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtp4Q9ER80 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rtp4Q9ER80 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rtp4Q9ER80 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp4Q9ER80 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp4Q9ER80 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp4Q9ER80 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp4Q9ER80 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp4Q9ER80 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp4Q9ER80 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp4Q9ER80 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp4Q9ER80 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp4Q9ER80 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp4Q9ER80 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Rtp4Q9ER80 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rtp4Q9ER80 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp4Q9ER80 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp4Q9ER80 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp4Q9ER80 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp4Q9ER80 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rtp4Q9ER80 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.29■□□□□ 0.2
Rtp4Q9ER80 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtp4Q9ER80 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rtp4Q9ER80 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtp4Q9ER80 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtp4Q9ER80 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.28■□□□□ 0.2
Rtp4Q9ER80 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rtp4Q9ER80 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtp4Q9ER80 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.28■□□□□ 0.2
Rtp4Q9ER80 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rtp4Q9ER80 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rtp4Q9ER80 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rtp4Q9ER80 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rtp4Q9ER80 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtp4Q9ER80 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rtp4Q9ER80 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.28■□□□□ 0.2
Rtp4Q9ER80 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtp4Q9ER80 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rtp4Q9ER80 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rtp4Q9ER80 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.27■□□□□ 0.2
Rtp4Q9ER80 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rtp4Q9ER80 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.27■□□□□ 0.2
Rtp4Q9ER80 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.27■□□□□ 0.2
Rtp4Q9ER80 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.27■□□□□ 0.2
Rtp4Q9ER80 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rtp4Q9ER80 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rtp4Q9ER80 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rtp4Q9ER80 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Rtp4Q9ER80 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rtp4Q9ER80 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rtp4Q9ER80 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rtp4Q9ER80 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rtp4Q9ER80 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms