Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-4Q9EQM3 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Nkx2-4Q9EQM3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.86■□□□□ 0.45
Nkx2-4Q9EQM3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.86■□□□□ 0.45
Nkx2-4Q9EQM3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Nkx2-4Q9EQM3 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-4Q9EQM3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-4Q9EQM3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-4Q9EQM3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-4Q9EQM3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-4Q9EQM3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-4Q9EQM3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-4Q9EQM3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-4Q9EQM3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-4Q9EQM3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-4Q9EQM3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-4Q9EQM3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Nkx2-4Q9EQM3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-4Q9EQM3 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-4Q9EQM3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-4Q9EQM3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Nkx2-4Q9EQM3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-4Q9EQM3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.85■□□□□ 0.45
Nkx2-4Q9EQM3 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.85■□□□□ 0.45
Nkx2-4Q9EQM3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-4Q9EQM3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-4Q9EQM3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-4Q9EQM3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Nkx2-4Q9EQM3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx2-4Q9EQM3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Nkx2-4Q9EQM3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-4Q9EQM3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-4Q9EQM3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-4Q9EQM3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-4Q9EQM3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.84■□□□□ 0.45
Nkx2-4Q9EQM3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.84■□□□□ 0.45
Nkx2-4Q9EQM3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-4Q9EQM3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-4Q9EQM3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-4Q9EQM3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-4Q9EQM3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx2-4Q9EQM3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Nkx2-4Q9EQM3 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nkx2-4Q9EQM3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nkx2-4Q9EQM3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nkx2-4Q9EQM3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
Nkx2-4Q9EQM3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nkx2-4Q9EQM3 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nkx2-4Q9EQM3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx2-4Q9EQM3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx2-4Q9EQM3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.83■□□□□ 0.44
Nkx2-4Q9EQM3 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Nkx2-4Q9EQM3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.83■□□□□ 0.44
Nkx2-4Q9EQM3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.83■□□□□ 0.44
Nkx2-4Q9EQM3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx2-4Q9EQM3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx2-4Q9EQM3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx2-4Q9EQM3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Nkx2-4Q9EQM3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx2-4Q9EQM3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx2-4Q9EQM3 Tgds-204ENSMUST00000228543 1594 ntBASIC17.83■□□□□ 0.44
Nkx2-4Q9EQM3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.82■□□□□ 0.44
Nkx2-4Q9EQM3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-4Q9EQM3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Nkx2-4Q9EQM3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.82■□□□□ 0.44
Nkx2-4Q9EQM3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-4Q9EQM3 Gm2651-201ENSMUST00000203560 838 ntBASIC17.82■□□□□ 0.44
Nkx2-4Q9EQM3 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-4Q9EQM3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.82■□□□□ 0.44
Nkx2-4Q9EQM3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.82■□□□□ 0.44
Nkx2-4Q9EQM3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-4Q9EQM3 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-4Q9EQM3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Nkx2-4Q9EQM3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-4Q9EQM3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Nkx2-4Q9EQM3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-4Q9EQM3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-4Q9EQM3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx2-4Q9EQM3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.82■□□□□ 0.44
Nkx2-4Q9EQM3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-4Q9EQM3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-4Q9EQM3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-4Q9EQM3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-4Q9EQM3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-4Q9EQM3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-4Q9EQM3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.81■□□□□ 0.44
Nkx2-4Q9EQM3 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.81■□□□□ 0.44
Nkx2-4Q9EQM3 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-4Q9EQM3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Nkx2-4Q9EQM3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-4Q9EQM3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Nkx2-4Q9EQM3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.81■□□□□ 0.44
Nkx2-4Q9EQM3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx2-4Q9EQM3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Nkx2-4Q9EQM3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-4Q9EQM3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
Nkx2-4Q9EQM3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-4Q9EQM3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.8■□□□□ 0.44
Nkx2-4Q9EQM3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx2-4Q9EQM3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms