Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps35Q9EQH3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps35Q9EQH3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vps35Q9EQH3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps35Q9EQH3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.41■□□□□ 0.38
Vps35Q9EQH3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps35Q9EQH3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.41■□□□□ 0.38
Vps35Q9EQH3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Vps35Q9EQH3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps35Q9EQH3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps35Q9EQH3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.41■□□□□ 0.38
Vps35Q9EQH3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.41■□□□□ 0.38
Vps35Q9EQH3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps35Q9EQH3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.41■□□□□ 0.38
Vps35Q9EQH3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps35Q9EQH3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps35Q9EQH3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps35Q9EQH3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps35Q9EQH3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Vps35Q9EQH3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps35Q9EQH3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vps35Q9EQH3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vps35Q9EQH3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps35Q9EQH3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps35Q9EQH3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps35Q9EQH3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps35Q9EQH3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vps35Q9EQH3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps35Q9EQH3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Vps35Q9EQH3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps35Q9EQH3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vps35Q9EQH3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.4■□□□□ 0.38
Vps35Q9EQH3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps35Q9EQH3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps35Q9EQH3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Vps35Q9EQH3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps35Q9EQH3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps35Q9EQH3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps35Q9EQH3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps35Q9EQH3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps35Q9EQH3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps35Q9EQH3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps35Q9EQH3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps35Q9EQH3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vps35Q9EQH3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
Vps35Q9EQH3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps35Q9EQH3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps35Q9EQH3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps35Q9EQH3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps35Q9EQH3 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.39■□□□□ 0.37
Vps35Q9EQH3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps35Q9EQH3 Mir1199-201ENSMUST00000117015 119 ntBASIC17.39■□□□□ 0.37
Vps35Q9EQH3 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.39■□□□□ 0.37
Vps35Q9EQH3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Vps35Q9EQH3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps35Q9EQH3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps35Q9EQH3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps35Q9EQH3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps35Q9EQH3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps35Q9EQH3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps35Q9EQH3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps35Q9EQH3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps35Q9EQH3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps35Q9EQH3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps35Q9EQH3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Vps35Q9EQH3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps35Q9EQH3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Vps35Q9EQH3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps35Q9EQH3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vps35Q9EQH3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vps35Q9EQH3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps35Q9EQH3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vps35Q9EQH3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps35Q9EQH3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps35Q9EQH3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps35Q9EQH3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.38■□□□□ 0.37
Vps35Q9EQH3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Vps35Q9EQH3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps35Q9EQH3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps35Q9EQH3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vps35Q9EQH3 Gm6576-201ENSMUST00000169678 883 ntBASIC17.38■□□□□ 0.37
Vps35Q9EQH3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Vps35Q9EQH3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.38■□□□□ 0.37
Vps35Q9EQH3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.38■□□□□ 0.37
Vps35Q9EQH3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Vps35Q9EQH3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Vps35Q9EQH3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Vps35Q9EQH3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.38■□□□□ 0.37
Vps35Q9EQH3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps35Q9EQH3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps35Q9EQH3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps35Q9EQH3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.38■□□□□ 0.37
Vps35Q9EQH3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.38■□□□□ 0.37
Vps35Q9EQH3 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.38■□□□□ 0.37
Vps35Q9EQH3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps35Q9EQH3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps35Q9EQH3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps35Q9EQH3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps35Q9EQH3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps35Q9EQH3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms