Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a3bpQ9EQG9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
Col4a3bpQ9EQG9 Gm10812-201ENSMUST00000099864 546 ntBASIC19.97■□□□□ 0.79
Col4a3bpQ9EQG9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.97■□□□□ 0.79
Col4a3bpQ9EQG9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Col4a3bpQ9EQG9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Col4a3bpQ9EQG9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Col4a3bpQ9EQG9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a3bpQ9EQG9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a3bpQ9EQG9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a3bpQ9EQG9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a3bpQ9EQG9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a3bpQ9EQG9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a3bpQ9EQG9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a3bpQ9EQG9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a3bpQ9EQG9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a3bpQ9EQG9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a3bpQ9EQG9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a3bpQ9EQG9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a3bpQ9EQG9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a3bpQ9EQG9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a3bpQ9EQG9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a3bpQ9EQG9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a3bpQ9EQG9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a3bpQ9EQG9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col4a3bpQ9EQG9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Col4a3bpQ9EQG9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Col4a3bpQ9EQG9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a3bpQ9EQG9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a3bpQ9EQG9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a3bpQ9EQG9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Col4a3bpQ9EQG9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a3bpQ9EQG9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a3bpQ9EQG9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.95■□□□□ 0.78
Col4a3bpQ9EQG9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a3bpQ9EQG9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a3bpQ9EQG9 Gm13401-201ENSMUST00000117074 291 ntBASIC19.95■□□□□ 0.78
Col4a3bpQ9EQG9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a3bpQ9EQG9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a3bpQ9EQG9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a3bpQ9EQG9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col4a3bpQ9EQG9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.94■□□□□ 0.78
Col4a3bpQ9EQG9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Col4a3bpQ9EQG9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a3bpQ9EQG9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a3bpQ9EQG9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a3bpQ9EQG9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a3bpQ9EQG9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a3bpQ9EQG9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a3bpQ9EQG9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a3bpQ9EQG9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.94■□□□□ 0.78
Col4a3bpQ9EQG9 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.94■□□□□ 0.78
Col4a3bpQ9EQG9 Gm18666-201ENSMUST00000190039 958 ntBASIC19.94■□□□□ 0.78
Col4a3bpQ9EQG9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a3bpQ9EQG9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a3bpQ9EQG9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col4a3bpQ9EQG9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a3bpQ9EQG9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a3bpQ9EQG9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
Col4a3bpQ9EQG9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a3bpQ9EQG9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a3bpQ9EQG9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a3bpQ9EQG9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Col4a3bpQ9EQG9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
Col4a3bpQ9EQG9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a3bpQ9EQG9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.93■□□□□ 0.78
Col4a3bpQ9EQG9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.93■□□□□ 0.78
Col4a3bpQ9EQG9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.93■□□□□ 0.78
Col4a3bpQ9EQG9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.93■□□□□ 0.78
Col4a3bpQ9EQG9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Col4a3bpQ9EQG9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Col4a3bpQ9EQG9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a3bpQ9EQG9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.93■□□□□ 0.78
Col4a3bpQ9EQG9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
Col4a3bpQ9EQG9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a3bpQ9EQG9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a3bpQ9EQG9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Col4a3bpQ9EQG9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col4a3bpQ9EQG9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Col4a3bpQ9EQG9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Col4a3bpQ9EQG9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col4a3bpQ9EQG9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col4a3bpQ9EQG9 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.92■□□□□ 0.78
Col4a3bpQ9EQG9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col4a3bpQ9EQG9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col4a3bpQ9EQG9 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.92■□□□□ 0.78
Col4a3bpQ9EQG9 Gm13158-201ENSMUST00000122007 736 ntBASIC19.92■□□□□ 0.78
Col4a3bpQ9EQG9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col4a3bpQ9EQG9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col4a3bpQ9EQG9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Col4a3bpQ9EQG9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a3bpQ9EQG9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Col4a3bpQ9EQG9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a3bpQ9EQG9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a3bpQ9EQG9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a3bpQ9EQG9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a3bpQ9EQG9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Col4a3bpQ9EQG9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a3bpQ9EQG9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a3bpQ9EQG9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms