Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne8Q9DC53 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne8Q9DC53 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.18■□□□□ 0.5
Cpne8Q9DC53 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.18■□□□□ 0.5
Cpne8Q9DC53 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne8Q9DC53 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne8Q9DC53 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne8Q9DC53 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne8Q9DC53 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
Cpne8Q9DC53 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne8Q9DC53 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Cpne8Q9DC53 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne8Q9DC53 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne8Q9DC53 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne8Q9DC53 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne8Q9DC53 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Cpne8Q9DC53 Gm10418-201ENSMUST00000100943 576 ntBASIC18.17■□□□□ 0.5
Cpne8Q9DC53 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cpne8Q9DC53 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne8Q9DC53 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.17■□□□□ 0.5
Cpne8Q9DC53 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne8Q9DC53 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne8Q9DC53 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cpne8Q9DC53 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne8Q9DC53 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne8Q9DC53 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Cpne8Q9DC53 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne8Q9DC53 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cpne8Q9DC53 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cpne8Q9DC53 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cpne8Q9DC53 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cpne8Q9DC53 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.16■□□□□ 0.5
Cpne8Q9DC53 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.16■□□□□ 0.5
Cpne8Q9DC53 Gm18025-201ENSMUST00000221733 862 ntBASIC18.16■□□□□ 0.5
Cpne8Q9DC53 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cpne8Q9DC53 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cpne8Q9DC53 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cpne8Q9DC53 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cpne8Q9DC53 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cpne8Q9DC53 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cpne8Q9DC53 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cpne8Q9DC53 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cpne8Q9DC53 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.15■□□□□ 0.5
Cpne8Q9DC53 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.15■□□□□ 0.5
Cpne8Q9DC53 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne8Q9DC53 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne8Q9DC53 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne8Q9DC53 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne8Q9DC53 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne8Q9DC53 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.15■□□□□ 0.5
Cpne8Q9DC53 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne8Q9DC53 Gm13158-201ENSMUST00000122007 736 ntBASIC18.15■□□□□ 0.5
Cpne8Q9DC53 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cpne8Q9DC53 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne8Q9DC53 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.15■□□□□ 0.5
Cpne8Q9DC53 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne8Q9DC53 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne8Q9DC53 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne8Q9DC53 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne8Q9DC53 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne8Q9DC53 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cpne8Q9DC53 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cpne8Q9DC53 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cpne8Q9DC53 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cpne8Q9DC53 Gm11643-201ENSMUST00000119578 864 ntBASIC18.14■□□□□ 0.49
Cpne8Q9DC53 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.14■□□□□ 0.49
Cpne8Q9DC53 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cpne8Q9DC53 Gm37292-201ENSMUST00000192062 758 ntBASIC18.14■□□□□ 0.49
Cpne8Q9DC53 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.14■□□□□ 0.49
Cpne8Q9DC53 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.14■□□□□ 0.49
Cpne8Q9DC53 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cpne8Q9DC53 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Cpne8Q9DC53 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.14■□□□□ 0.49
Cpne8Q9DC53 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cpne8Q9DC53 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.14■□□□□ 0.49
Cpne8Q9DC53 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cpne8Q9DC53 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cpne8Q9DC53 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cpne8Q9DC53 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne8Q9DC53 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne8Q9DC53 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.13■□□□□ 0.49
Cpne8Q9DC53 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne8Q9DC53 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne8Q9DC53 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne8Q9DC53 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Cpne8Q9DC53 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.13■□□□□ 0.49
Cpne8Q9DC53 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.13■□□□□ 0.49
Cpne8Q9DC53 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Cpne8Q9DC53 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne8Q9DC53 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cpne8Q9DC53 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne8Q9DC53 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne8Q9DC53 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne8Q9DC53 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne8Q9DC53 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.12■□□□□ 0.49
Cpne8Q9DC53 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cpne8Q9DC53 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.12■□□□□ 0.49
Cpne8Q9DC53 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpne8Q9DC53 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.12■□□□□ 0.49
Cpne8Q9DC53 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms