Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Stag1Q9D3E6 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Stag1Q9D3E6 Gm21559-201ENSMUST00000220638 855 ntBASIC20.75■□□□□ 0.91
Stag1Q9D3E6 Gm8587-201ENSMUST00000076538 843 ntBASIC20.75■□□□□ 0.91
Stag1Q9D3E6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Stag1Q9D3E6 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Stag1Q9D3E6 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Stag1Q9D3E6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Stag1Q9D3E6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Stag1Q9D3E6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Stag1Q9D3E6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Stag1Q9D3E6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Stag1Q9D3E6 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Stag1Q9D3E6 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.74■□□□□ 0.91
Stag1Q9D3E6 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Stag1Q9D3E6 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.74■□□□□ 0.91
Stag1Q9D3E6 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.74■□□□□ 0.91
Stag1Q9D3E6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.74■□□□□ 0.91
Stag1Q9D3E6 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Stag1Q9D3E6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Stag1Q9D3E6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Stag1Q9D3E6 Mir1668-201ENSMUST00000184114 107 ntBASIC20.74■□□□□ 0.91
Stag1Q9D3E6 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Stag1Q9D3E6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Stag1Q9D3E6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Stag1Q9D3E6 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Stag1Q9D3E6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Stag1Q9D3E6 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Stag1Q9D3E6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.74■□□□□ 0.91
Stag1Q9D3E6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Stag1Q9D3E6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Stag1Q9D3E6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Stag1Q9D3E6 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Stag1Q9D3E6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Stag1Q9D3E6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Stag1Q9D3E6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
Stag1Q9D3E6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.73■□□□□ 0.91
Stag1Q9D3E6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.73■□□□□ 0.91
Stag1Q9D3E6 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Stag1Q9D3E6 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Stag1Q9D3E6 Gm27389-201ENSMUST00000183622 195 ntBASIC20.73■□□□□ 0.91
Stag1Q9D3E6 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.73■□□□□ 0.91
Stag1Q9D3E6 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Stag1Q9D3E6 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Stag1Q9D3E6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.73■□□□□ 0.91
Stag1Q9D3E6 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Stag1Q9D3E6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.73■□□□□ 0.91
Stag1Q9D3E6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Stag1Q9D3E6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Stag1Q9D3E6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Stag1Q9D3E6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Stag1Q9D3E6 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Stag1Q9D3E6 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Stag1Q9D3E6 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Stag1Q9D3E6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Stag1Q9D3E6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Stag1Q9D3E6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Stag1Q9D3E6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Stag1Q9D3E6 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Stag1Q9D3E6 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Stag1Q9D3E6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Stag1Q9D3E6 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Stag1Q9D3E6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Stag1Q9D3E6 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.71■□□□□ 0.91
Stag1Q9D3E6 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Stag1Q9D3E6 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Stag1Q9D3E6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
Stag1Q9D3E6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.71■□□□□ 0.91
Stag1Q9D3E6 Gm17661-201ENSMUST00000170317 270 ntBASIC20.71■□□□□ 0.91
Stag1Q9D3E6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Stag1Q9D3E6 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Stag1Q9D3E6 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Stag1Q9D3E6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Stag1Q9D3E6 Grk6-206ENSMUST00000224995 2971 ntBASIC20.71■□□□□ 0.91
Stag1Q9D3E6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Stag1Q9D3E6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Stag1Q9D3E6 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Stag1Q9D3E6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.71■□□□□ 0.91
Stag1Q9D3E6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Stag1Q9D3E6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Stag1Q9D3E6 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Stag1Q9D3E6 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stag1Q9D3E6 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stag1Q9D3E6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stag1Q9D3E6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.7■□□□□ 0.9
Stag1Q9D3E6 Gm7213-201ENSMUST00000215977 950 ntBASIC20.7■□□□□ 0.9
Stag1Q9D3E6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stag1Q9D3E6 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stag1Q9D3E6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stag1Q9D3E6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.7■□□□□ 0.9
Stag1Q9D3E6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stag1Q9D3E6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stag1Q9D3E6 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.69■□□□□ 0.9
Stag1Q9D3E6 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Stag1Q9D3E6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Stag1Q9D3E6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Stag1Q9D3E6 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Stag1Q9D3E6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Stag1Q9D3E6 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Stag1Q9D3E6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms