Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
Trim42Q9D2H5 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trim42Q9D2H5 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim42Q9D2H5 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim42Q9D2H5 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim42Q9D2H5 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim42Q9D2H5 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim42Q9D2H5 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim42Q9D2H5 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trim42Q9D2H5 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim42Q9D2H5 Gm13146-201ENSMUST00000118508 780 ntBASIC17.42■□□□□ 0.38
Trim42Q9D2H5 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.42■□□□□ 0.38
Trim42Q9D2H5 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim42Q9D2H5 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Trim42Q9D2H5 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trim42Q9D2H5 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim42Q9D2H5 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim42Q9D2H5 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim42Q9D2H5 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim42Q9D2H5 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trim42Q9D2H5 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim42Q9D2H5 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim42Q9D2H5 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.41■□□□□ 0.38
Trim42Q9D2H5 Gm13534-201ENSMUST00000121169 513 ntBASIC17.41■□□□□ 0.38
Trim42Q9D2H5 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.41■□□□□ 0.38
Trim42Q9D2H5 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim42Q9D2H5 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim42Q9D2H5 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim42Q9D2H5 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim42Q9D2H5 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trim42Q9D2H5 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim42Q9D2H5 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim42Q9D2H5 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.41■□□□□ 0.38
Trim42Q9D2H5 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.41■□□□□ 0.38
Trim42Q9D2H5 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim42Q9D2H5 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim42Q9D2H5 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim42Q9D2H5 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim42Q9D2H5 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
Trim42Q9D2H5 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trim42Q9D2H5 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim42Q9D2H5 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim42Q9D2H5 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim42Q9D2H5 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trim42Q9D2H5 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim42Q9D2H5 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim42Q9D2H5 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.4■□□□□ 0.38
Trim42Q9D2H5 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim42Q9D2H5 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim42Q9D2H5 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim42Q9D2H5 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trim42Q9D2H5 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.4■□□□□ 0.38
Trim42Q9D2H5 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim42Q9D2H5 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim42Q9D2H5 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Trim42Q9D2H5 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim42Q9D2H5 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim42Q9D2H5 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.4■□□□□ 0.38
Trim42Q9D2H5 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.39■□□□□ 0.37
Trim42Q9D2H5 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Trim42Q9D2H5 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim42Q9D2H5 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim42Q9D2H5 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trim42Q9D2H5 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim42Q9D2H5 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim42Q9D2H5 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim42Q9D2H5 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim42Q9D2H5 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.39■□□□□ 0.37
Trim42Q9D2H5 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim42Q9D2H5 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim42Q9D2H5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim42Q9D2H5 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim42Q9D2H5 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trim42Q9D2H5 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim42Q9D2H5 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim42Q9D2H5 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim42Q9D2H5 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim42Q9D2H5 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim42Q9D2H5 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim42Q9D2H5 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trim42Q9D2H5 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim42Q9D2H5 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Trim42Q9D2H5 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim42Q9D2H5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim42Q9D2H5 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim42Q9D2H5 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim42Q9D2H5 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim42Q9D2H5 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trim42Q9D2H5 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim42Q9D2H5 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.38■□□□□ 0.37
Trim42Q9D2H5 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.38■□□□□ 0.37
Trim42Q9D2H5 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim42Q9D2H5 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim42Q9D2H5 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim42Q9D2H5 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim42Q9D2H5 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim42Q9D2H5 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim42Q9D2H5 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim42Q9D2H5 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim42Q9D2H5 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms