Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk1aQ9D132 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk1aQ9D132 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.51■□□□□ 0.23
Upk1aQ9D132 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk1aQ9D132 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk1aQ9D132 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk1aQ9D132 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk1aQ9D132 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk1aQ9D132 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk1aQ9D132 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk1aQ9D132 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk1aQ9D132 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.51■□□□□ 0.23
Upk1aQ9D132 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Upk1aQ9D132 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk1aQ9D132 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Upk1aQ9D132 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk1aQ9D132 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Upk1aQ9D132 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk1aQ9D132 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Upk1aQ9D132 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk1aQ9D132 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk1aQ9D132 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.51■□□□□ 0.23
Upk1aQ9D132 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Upk1aQ9D132 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk1aQ9D132 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk1aQ9D132 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk1aQ9D132 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk1aQ9D132 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk1aQ9D132 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Upk1aQ9D132 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Upk1aQ9D132 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Upk1aQ9D132 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Upk1aQ9D132 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upk1aQ9D132 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upk1aQ9D132 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.5■□□□□ 0.23
Upk1aQ9D132 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upk1aQ9D132 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upk1aQ9D132 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Upk1aQ9D132 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upk1aQ9D132 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upk1aQ9D132 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upk1aQ9D132 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upk1aQ9D132 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.5■□□□□ 0.23
Upk1aQ9D132 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upk1aQ9D132 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upk1aQ9D132 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Upk1aQ9D132 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Upk1aQ9D132 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.5■□□□□ 0.23
Upk1aQ9D132 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Upk1aQ9D132 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upk1aQ9D132 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upk1aQ9D132 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upk1aQ9D132 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upk1aQ9D132 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Upk1aQ9D132 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upk1aQ9D132 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upk1aQ9D132 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Upk1aQ9D132 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Upk1aQ9D132 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Upk1aQ9D132 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Upk1aQ9D132 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Upk1aQ9D132 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.49■□□□□ 0.23
Upk1aQ9D132 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Upk1aQ9D132 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Upk1aQ9D132 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Upk1aQ9D132 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.49■□□□□ 0.23
Upk1aQ9D132 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.49■□□□□ 0.23
Upk1aQ9D132 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Upk1aQ9D132 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Upk1aQ9D132 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.49■□□□□ 0.23
Upk1aQ9D132 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Upk1aQ9D132 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Upk1aQ9D132 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.49■□□□□ 0.23
Upk1aQ9D132 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Upk1aQ9D132 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Upk1aQ9D132 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Upk1aQ9D132 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Upk1aQ9D132 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Upk1aQ9D132 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Upk1aQ9D132 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Upk1aQ9D132 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Upk1aQ9D132 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Upk1aQ9D132 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Upk1aQ9D132 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Upk1aQ9D132 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Upk1aQ9D132 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Upk1aQ9D132 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.48■□□□□ 0.23
Upk1aQ9D132 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Upk1aQ9D132 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.48■□□□□ 0.23
Upk1aQ9D132 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Upk1aQ9D132 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Upk1aQ9D132 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Upk1aQ9D132 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Upk1aQ9D132 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Upk1aQ9D132 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Upk1aQ9D132 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Upk1aQ9D132 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Upk1aQ9D132 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Upk1aQ9D132 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Upk1aQ9D132 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms