Protein–RNA interactions for Protein: Q9D035

Nkain1, Sodium/potassium-transporting ATPase subunit beta-1-interacting protein 1, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkain1Q9D035 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkain1Q9D035 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Nkain1Q9D035 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkain1Q9D035 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Nkain1Q9D035 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkain1Q9D035 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Nkain1Q9D035 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkain1Q9D035 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.21■□□□□ 0.19
Nkain1Q9D035 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Nkain1Q9D035 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkain1Q9D035 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.21■□□□□ 0.19
Nkain1Q9D035 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Nkain1Q9D035 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.21■□□□□ 0.19
Nkain1Q9D035 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkain1Q9D035 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkain1Q9D035 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nkain1Q9D035 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkain1Q9D035 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Nkain1Q9D035 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nkain1Q9D035 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Nkain1Q9D035 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Nkain1Q9D035 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkain1Q9D035 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkain1Q9D035 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkain1Q9D035 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.2■□□□□ 0.18
Nkain1Q9D035 Gm16061-201ENSMUST00000122167 857 ntBASIC16.2■□□□□ 0.18
Nkain1Q9D035 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkain1Q9D035 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkain1Q9D035 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Nkain1Q9D035 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkain1Q9D035 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkain1Q9D035 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkain1Q9D035 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkain1Q9D035 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Nkain1Q9D035 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkain1Q9D035 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkain1Q9D035 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkain1Q9D035 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nkain1Q9D035 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkain1Q9D035 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.19■□□□□ 0.18
Nkain1Q9D035 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nkain1Q9D035 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nkain1Q9D035 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nkain1Q9D035 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
Nkain1Q9D035 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkain1Q9D035 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Nkain1Q9D035 Gm6659-201ENSMUST00000174752 547 ntBASIC16.19■□□□□ 0.18
Nkain1Q9D035 Mir8112-201ENSMUST00000184382 131 ntBASIC16.19■□□□□ 0.18
Nkain1Q9D035 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Nkain1Q9D035 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.19■□□□□ 0.18
Nkain1Q9D035 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nkain1Q9D035 Gm18032-201ENSMUST00000222541 538 ntBASIC16.19■□□□□ 0.18
Nkain1Q9D035 Il3ra-202ENSMUST00000223589 738 ntBASIC16.19■□□□□ 0.18
Nkain1Q9D035 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Nkain1Q9D035 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.19■□□□□ 0.18
Nkain1Q9D035 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkain1Q9D035 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
Nkain1Q9D035 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkain1Q9D035 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Nkain1Q9D035 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkain1Q9D035 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nkain1Q9D035 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkain1Q9D035 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nkain1Q9D035 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkain1Q9D035 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nkain1Q9D035 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkain1Q9D035 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.18■□□□□ 0.18
Nkain1Q9D035 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkain1Q9D035 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Nkain1Q9D035 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkain1Q9D035 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nkain1Q9D035 Gm10013-201ENSMUST00000106074 672 ntBASIC16.18■□□□□ 0.18
Nkain1Q9D035 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Nkain1Q9D035 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkain1Q9D035 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.18■□□□□ 0.18
Nkain1Q9D035 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Nkain1Q9D035 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkain1Q9D035 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Nkain1Q9D035 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkain1Q9D035 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nkain1Q9D035 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nkain1Q9D035 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nkain1Q9D035 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkain1Q9D035 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkain1Q9D035 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkain1Q9D035 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nkain1Q9D035 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nkain1Q9D035 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nkain1Q9D035 Gm13474-201ENSMUST00000122466 815 ntBASIC16.17■□□□□ 0.18
Nkain1Q9D035 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.17■□□□□ 0.18
Nkain1Q9D035 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkain1Q9D035 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.17■□□□□ 0.18
Nkain1Q9D035 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nkain1Q9D035 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.17■□□□□ 0.18
Nkain1Q9D035 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkain1Q9D035 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkain1Q9D035 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkain1Q9D035 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkain1Q9D035 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.17■□□□□ 0.18
Nkain1Q9D035 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms