Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.65■□□□□ 0.26
Shmt2Q9CZN7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.65■□□□□ 0.26
Shmt2Q9CZN7 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shmt2Q9CZN7 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.65■□□□□ 0.26
Shmt2Q9CZN7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Shmt2Q9CZN7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Shmt2Q9CZN7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shmt2Q9CZN7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Shmt2Q9CZN7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shmt2Q9CZN7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Shmt2Q9CZN7 Trmt13-210ENSMUST00000198454 880 ntBASIC16.64■□□□□ 0.25
Shmt2Q9CZN7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shmt2Q9CZN7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.64■□□□□ 0.25
Shmt2Q9CZN7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shmt2Q9CZN7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shmt2Q9CZN7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Shmt2Q9CZN7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shmt2Q9CZN7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shmt2Q9CZN7 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shmt2Q9CZN7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.63■□□□□ 0.25
Shmt2Q9CZN7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.63■□□□□ 0.25
Shmt2Q9CZN7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Shmt2Q9CZN7 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shmt2Q9CZN7 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shmt2Q9CZN7 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.63■□□□□ 0.25
Shmt2Q9CZN7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Shmt2Q9CZN7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Shmt2Q9CZN7 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Shmt2Q9CZN7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shmt2Q9CZN7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shmt2Q9CZN7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Shmt2Q9CZN7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Shmt2Q9CZN7 Gm37856-201ENSMUST00000191634 999 ntBASIC16.63■□□□□ 0.25
Shmt2Q9CZN7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Shmt2Q9CZN7 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.63■□□□□ 0.25
Shmt2Q9CZN7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shmt2Q9CZN7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shmt2Q9CZN7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Shmt2Q9CZN7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Shmt2Q9CZN7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shmt2Q9CZN7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Shmt2Q9CZN7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.63■□□□□ 0.25
Shmt2Q9CZN7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Shmt2Q9CZN7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shmt2Q9CZN7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shmt2Q9CZN7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shmt2Q9CZN7 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shmt2Q9CZN7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shmt2Q9CZN7 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shmt2Q9CZN7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shmt2Q9CZN7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shmt2Q9CZN7 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shmt2Q9CZN7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Shmt2Q9CZN7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shmt2Q9CZN7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shmt2Q9CZN7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shmt2Q9CZN7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shmt2Q9CZN7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shmt2Q9CZN7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Shmt2Q9CZN7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Shmt2Q9CZN7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shmt2Q9CZN7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shmt2Q9CZN7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shmt2Q9CZN7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shmt2Q9CZN7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shmt2Q9CZN7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Shmt2Q9CZN7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shmt2Q9CZN7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Shmt2Q9CZN7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shmt2Q9CZN7 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shmt2Q9CZN7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.61■□□□□ 0.25
Shmt2Q9CZN7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Shmt2Q9CZN7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shmt2Q9CZN7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shmt2Q9CZN7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shmt2Q9CZN7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Shmt2Q9CZN7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Shmt2Q9CZN7 Gm10653-202ENSMUST00000139570 835 ntBASIC16.61■□□□□ 0.25
Shmt2Q9CZN7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Shmt2Q9CZN7 Gm27275-201ENSMUST00000184318 272 ntBASIC16.61■□□□□ 0.25
Shmt2Q9CZN7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.61■□□□□ 0.25
Shmt2Q9CZN7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shmt2Q9CZN7 Zfp783-201ENSMUST00000095946 670 ntBASIC16.61■□□□□ 0.25
Shmt2Q9CZN7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Shmt2Q9CZN7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shmt2Q9CZN7 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shmt2Q9CZN7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shmt2Q9CZN7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shmt2Q9CZN7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shmt2Q9CZN7 Haglr-201ENSMUST00000100000 2085 ntBASIC16.6■□□□□ 0.25
Shmt2Q9CZN7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shmt2Q9CZN7 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shmt2Q9CZN7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shmt2Q9CZN7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Shmt2Q9CZN7 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shmt2Q9CZN7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shmt2Q9CZN7 Gm11927-201ENSMUST00000118472 759 ntBASIC16.6■□□□□ 0.25
Shmt2Q9CZN7 Gm27011-201ENSMUST00000182352 972 ntBASIC16.6■□□□□ 0.25
Shmt2Q9CZN7 Gm38285-201ENSMUST00000192928 922 ntBASIC16.6■□□□□ 0.25
Shmt2Q9CZN7 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms