Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Gm42918-201ENSMUST00000199249 1580 ntBASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Gm5408-201ENSMUST00000197998 747 ntBASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl55Q9CZ83 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl55Q9CZ83 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl55Q9CZ83 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl55Q9CZ83 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC11.49□□□□□ -0.57
Mrpl55Q9CZ83 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl55Q9CZ83 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl55Q9CZ83 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl55Q9CZ83 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl55Q9CZ83 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC11.49□□□□□ -0.57
Mrpl55Q9CZ83 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC11.49□□□□□ -0.57
Mrpl55Q9CZ83 Gm13534-201ENSMUST00000121169 513 ntBASIC11.49□□□□□ -0.57
Mrpl55Q9CZ83 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl55Q9CZ83 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl55Q9CZ83 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl55Q9CZ83 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl55Q9CZ83 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Mrpl55Q9CZ83 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl55Q9CZ83 Gm10655-201ENSMUST00000098658 1397 ntBASIC11.49□□□□□ -0.57
Mrpl55Q9CZ83 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Mrpl55Q9CZ83 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Mrpl55Q9CZ83 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl55Q9CZ83 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl55Q9CZ83 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl55Q9CZ83 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl55Q9CZ83 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mrpl55Q9CZ83 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl55Q9CZ83 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl55Q9CZ83 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl55Q9CZ83 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl55Q9CZ83 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl55Q9CZ83 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl55Q9CZ83 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl55Q9CZ83 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl55Q9CZ83 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl55Q9CZ83 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC11.48□□□□□ -0.57
Mrpl55Q9CZ83 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl55Q9CZ83 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Mrpl55Q9CZ83 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC11.48□□□□□ -0.57
Mrpl55Q9CZ83 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl55Q9CZ83 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC11.48□□□□□ -0.57
Mrpl55Q9CZ83 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Mrpl55Q9CZ83 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Mrpl55Q9CZ83 Cxcl14-202ENSMUST00000224801 1467 ntBASIC11.48□□□□□ -0.57
Mrpl55Q9CZ83 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl55Q9CZ83 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl55Q9CZ83 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl55Q9CZ83 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl55Q9CZ83 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl55Q9CZ83 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl55Q9CZ83 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Mrpl55Q9CZ83 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl55Q9CZ83 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl55Q9CZ83 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC11.48□□□□□ -0.57
Mrpl55Q9CZ83 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mrpl55Q9CZ83 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Mrpl55Q9CZ83 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl55Q9CZ83 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl55Q9CZ83 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl55Q9CZ83 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl55Q9CZ83 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC11.47□□□□□ -0.57
Mrpl55Q9CZ83 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.47□□□□□ -0.57
Mrpl55Q9CZ83 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl55Q9CZ83 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl55Q9CZ83 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mrpl55Q9CZ83 Gm12441-201ENSMUST00000121806 588 ntBASIC11.47□□□□□ -0.57
Mrpl55Q9CZ83 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
Mrpl55Q9CZ83 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Mrpl55Q9CZ83 Gm27032-201ENSMUST00000183124 1116 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms