Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.73■□□□□ 0.75
Chd1lQ9CXF7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chd1lQ9CXF7 Mir8112-201ENSMUST00000184382 131 ntBASIC19.73■□□□□ 0.75
Chd1lQ9CXF7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chd1lQ9CXF7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chd1lQ9CXF7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chd1lQ9CXF7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chd1lQ9CXF7 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chd1lQ9CXF7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chd1lQ9CXF7 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chd1lQ9CXF7 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.73■□□□□ 0.75
Chd1lQ9CXF7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1lQ9CXF7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1lQ9CXF7 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1lQ9CXF7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1lQ9CXF7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1lQ9CXF7 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Chd1lQ9CXF7 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1lQ9CXF7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1lQ9CXF7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.72■□□□□ 0.75
Chd1lQ9CXF7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1lQ9CXF7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Chd1lQ9CXF7 Gm45417-201ENSMUST00000209533 758 ntBASIC19.72■□□□□ 0.75
Chd1lQ9CXF7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1lQ9CXF7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.72■□□□□ 0.75
Chd1lQ9CXF7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Chd1lQ9CXF7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Chd1lQ9CXF7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1lQ9CXF7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1lQ9CXF7 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1lQ9CXF7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1lQ9CXF7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1lQ9CXF7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.72■□□□□ 0.75
Chd1lQ9CXF7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1lQ9CXF7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1lQ9CXF7 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.72■□□□□ 0.75
Chd1lQ9CXF7 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1lQ9CXF7 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd1lQ9CXF7 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Chd1lQ9CXF7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd1lQ9CXF7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd1lQ9CXF7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chd1lQ9CXF7 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Chd1lQ9CXF7 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd1lQ9CXF7 Gm12821-201ENSMUST00000120022 600 ntBASIC19.71■□□□□ 0.75
Chd1lQ9CXF7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.71■□□□□ 0.75
Chd1lQ9CXF7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chd1lQ9CXF7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.71■□□□□ 0.75
Chd1lQ9CXF7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chd1lQ9CXF7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.71■□□□□ 0.75
Chd1lQ9CXF7 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19.71■□□□□ 0.75
Chd1lQ9CXF7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd1lQ9CXF7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd1lQ9CXF7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd1lQ9CXF7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd1lQ9CXF7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd1lQ9CXF7 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd1lQ9CXF7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Chd1lQ9CXF7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd1lQ9CXF7 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd1lQ9CXF7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd1lQ9CXF7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd1lQ9CXF7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Chd1lQ9CXF7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Chd1lQ9CXF7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd1lQ9CXF7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd1lQ9CXF7 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Chd1lQ9CXF7 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.7■□□□□ 0.74
Chd1lQ9CXF7 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.7■□□□□ 0.74
Chd1lQ9CXF7 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd1lQ9CXF7 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd1lQ9CXF7 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd1lQ9CXF7 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd1lQ9CXF7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Chd1lQ9CXF7 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd1lQ9CXF7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.69■□□□□ 0.74
Chd1lQ9CXF7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd1lQ9CXF7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd1lQ9CXF7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.69■□□□□ 0.74
Chd1lQ9CXF7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd1lQ9CXF7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd1lQ9CXF7 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chd1lQ9CXF7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Chd1lQ9CXF7 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd1lQ9CXF7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd1lQ9CXF7 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Chd1lQ9CXF7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd1lQ9CXF7 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1lQ9CXF7 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1lQ9CXF7 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.68■□□□□ 0.74
Chd1lQ9CXF7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Chd1lQ9CXF7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.68■□□□□ 0.74
Chd1lQ9CXF7 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.68■□□□□ 0.74
Chd1lQ9CXF7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1lQ9CXF7 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1lQ9CXF7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1lQ9CXF7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1lQ9CXF7 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd1lQ9CXF7 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.68■□□□□ 0.74
Chd1lQ9CXF7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms