Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Khdc3Q9CWU5 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.72■□□□□ 0.27
Khdc3Q9CWU5 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Khdc3Q9CWU5 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Khdc3Q9CWU5 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Khdc3Q9CWU5 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Khdc3Q9CWU5 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Khdc3Q9CWU5 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Khdc3Q9CWU5 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Khdc3Q9CWU5 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Khdc3Q9CWU5 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.72■□□□□ 0.27
Khdc3Q9CWU5 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Khdc3Q9CWU5 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Khdc3Q9CWU5 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Khdc3Q9CWU5 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Khdc3Q9CWU5 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Khdc3Q9CWU5 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.71■□□□□ 0.27
Khdc3Q9CWU5 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Khdc3Q9CWU5 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.71■□□□□ 0.27
Khdc3Q9CWU5 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Khdc3Q9CWU5 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Khdc3Q9CWU5 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Khdc3Q9CWU5 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Khdc3Q9CWU5 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Khdc3Q9CWU5 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Khdc3Q9CWU5 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Khdc3Q9CWU5 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.71■□□□□ 0.27
Khdc3Q9CWU5 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Khdc3Q9CWU5 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Khdc3Q9CWU5 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Khdc3Q9CWU5 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Khdc3Q9CWU5 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Khdc3Q9CWU5 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Khdc3Q9CWU5 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Khdc3Q9CWU5 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Khdc3Q9CWU5 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Khdc3Q9CWU5 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Khdc3Q9CWU5 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Khdc3Q9CWU5 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Khdc3Q9CWU5 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.7■□□□□ 0.26
Khdc3Q9CWU5 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Khdc3Q9CWU5 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Khdc3Q9CWU5 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Khdc3Q9CWU5 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Khdc3Q9CWU5 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Khdc3Q9CWU5 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Khdc3Q9CWU5 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Khdc3Q9CWU5 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Khdc3Q9CWU5 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Khdc3Q9CWU5 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Khdc3Q9CWU5 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
Khdc3Q9CWU5 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Khdc3Q9CWU5 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Khdc3Q9CWU5 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Khdc3Q9CWU5 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Khdc3Q9CWU5 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Khdc3Q9CWU5 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Khdc3Q9CWU5 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Khdc3Q9CWU5 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.69■□□□□ 0.26
Khdc3Q9CWU5 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Khdc3Q9CWU5 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.69■□□□□ 0.26
Khdc3Q9CWU5 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.69■□□□□ 0.26
Khdc3Q9CWU5 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Khdc3Q9CWU5 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Khdc3Q9CWU5 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.69■□□□□ 0.26
Khdc3Q9CWU5 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Khdc3Q9CWU5 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Khdc3Q9CWU5 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Khdc3Q9CWU5 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Khdc3Q9CWU5 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Khdc3Q9CWU5 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.69■□□□□ 0.26
Khdc3Q9CWU5 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Khdc3Q9CWU5 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Khdc3Q9CWU5 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Khdc3Q9CWU5 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Khdc3Q9CWU5 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Khdc3Q9CWU5 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Khdc3Q9CWU5 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Khdc3Q9CWU5 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.68■□□□□ 0.26
Khdc3Q9CWU5 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Khdc3Q9CWU5 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Khdc3Q9CWU5 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Khdc3Q9CWU5 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Khdc3Q9CWU5 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.68■□□□□ 0.26
Khdc3Q9CWU5 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.68■□□□□ 0.26
Khdc3Q9CWU5 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Khdc3Q9CWU5 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Khdc3Q9CWU5 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Khdc3Q9CWU5 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Khdc3Q9CWU5 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Khdc3Q9CWU5 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.68■□□□□ 0.26
Khdc3Q9CWU5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Khdc3Q9CWU5 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Khdc3Q9CWU5 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Khdc3Q9CWU5 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Khdc3Q9CWU5 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Khdc3Q9CWU5 Gm13401-201ENSMUST00000117074 291 ntBASIC16.67■□□□□ 0.26
Khdc3Q9CWU5 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.67■□□□□ 0.26
Khdc3Q9CWU5 Gm8969-201ENSMUST00000199694 526 ntBASIC16.67■□□□□ 0.26
Khdc3Q9CWU5 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms