Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.84■□□□□ 0.45
Cldnd1Q9CQX5 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldnd1Q9CQX5 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldnd1Q9CQX5 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldnd1Q9CQX5 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldnd1Q9CQX5 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cldnd1Q9CQX5 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldnd1Q9CQX5 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldnd1Q9CQX5 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cldnd1Q9CQX5 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
Cldnd1Q9CQX5 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cldnd1Q9CQX5 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cldnd1Q9CQX5 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldnd1Q9CQX5 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Cldnd1Q9CQX5 Gm12895-201ENSMUST00000122214 226 ntBASIC17.83■□□□□ 0.44
Cldnd1Q9CQX5 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.83■□□□□ 0.44
Cldnd1Q9CQX5 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Cldnd1Q9CQX5 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cldnd1Q9CQX5 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.83■□□□□ 0.44
Cldnd1Q9CQX5 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldnd1Q9CQX5 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cldnd1Q9CQX5 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.83■□□□□ 0.44
Cldnd1Q9CQX5 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldnd1Q9CQX5 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.83■□□□□ 0.44
Cldnd1Q9CQX5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldnd1Q9CQX5 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Cldnd1Q9CQX5 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldnd1Q9CQX5 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cldnd1Q9CQX5 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cldnd1Q9CQX5 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cldnd1Q9CQX5 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldnd1Q9CQX5 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldnd1Q9CQX5 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Cldnd1Q9CQX5 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cldnd1Q9CQX5 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldnd1Q9CQX5 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cldnd1Q9CQX5 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cldnd1Q9CQX5 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.82■□□□□ 0.44
Cldnd1Q9CQX5 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldnd1Q9CQX5 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cldnd1Q9CQX5 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldnd1Q9CQX5 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldnd1Q9CQX5 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldnd1Q9CQX5 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldnd1Q9CQX5 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cldnd1Q9CQX5 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cldnd1Q9CQX5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cldnd1Q9CQX5 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldnd1Q9CQX5 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldnd1Q9CQX5 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cldnd1Q9CQX5 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cldnd1Q9CQX5 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cldnd1Q9CQX5 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldnd1Q9CQX5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldnd1Q9CQX5 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldnd1Q9CQX5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.81■□□□□ 0.44
Cldnd1Q9CQX5 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldnd1Q9CQX5 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldnd1Q9CQX5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldnd1Q9CQX5 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldnd1Q9CQX5 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldnd1Q9CQX5 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldnd1Q9CQX5 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldnd1Q9CQX5 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldnd1Q9CQX5 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Cldnd1Q9CQX5 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.8■□□□□ 0.44
Cldnd1Q9CQX5 Gm10052-201ENSMUST00000168019 960 ntBASIC17.8■□□□□ 0.44
Cldnd1Q9CQX5 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cldnd1Q9CQX5 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cldnd1Q9CQX5 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.8■□□□□ 0.44
Cldnd1Q9CQX5 Gm7729-201ENSMUST00000050143 801 ntBASIC17.8■□□□□ 0.44
Cldnd1Q9CQX5 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.8■□□□□ 0.44
Cldnd1Q9CQX5 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.8■□□□□ 0.44
Cldnd1Q9CQX5 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cldnd1Q9CQX5 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.8■□□□□ 0.44
Cldnd1Q9CQX5 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Cldnd1Q9CQX5 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldnd1Q9CQX5 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldnd1Q9CQX5 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldnd1Q9CQX5 BC021767-201ENSMUST00000126387 1716 ntBASIC17.79■□□□□ 0.44
Cldnd1Q9CQX5 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldnd1Q9CQX5 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.79■□□□□ 0.44
Cldnd1Q9CQX5 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.79■□□□□ 0.44
Cldnd1Q9CQX5 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.79■□□□□ 0.44
Cldnd1Q9CQX5 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.79■□□□□ 0.44
Cldnd1Q9CQX5 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldnd1Q9CQX5 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldnd1Q9CQX5 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cldnd1Q9CQX5 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldnd1Q9CQX5 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.79■□□□□ 0.44
Cldnd1Q9CQX5 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Cldnd1Q9CQX5 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldnd1Q9CQX5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldnd1Q9CQX5 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldnd1Q9CQX5 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldnd1Q9CQX5 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldnd1Q9CQX5 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldnd1Q9CQX5 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldnd1Q9CQX5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldnd1Q9CQX5 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms