Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retreg3Q9CQV4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retreg3Q9CQV4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retreg3Q9CQV4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retreg3Q9CQV4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retreg3Q9CQV4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retreg3Q9CQV4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retreg3Q9CQV4 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.49■□□□□ 0.39
Retreg3Q9CQV4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retreg3Q9CQV4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.49■□□□□ 0.39
Retreg3Q9CQV4 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retreg3Q9CQV4 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retreg3Q9CQV4 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.49■□□□□ 0.39
Retreg3Q9CQV4 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.49■□□□□ 0.39
Retreg3Q9CQV4 Gm43930-201ENSMUST00000203868 845 ntBASIC17.49■□□□□ 0.39
Retreg3Q9CQV4 Gm32390-201ENSMUST00000212713 1172 ntBASIC17.49■□□□□ 0.39
Retreg3Q9CQV4 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Retreg3Q9CQV4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retreg3Q9CQV4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retreg3Q9CQV4 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retreg3Q9CQV4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retreg3Q9CQV4 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retreg3Q9CQV4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Retreg3Q9CQV4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Retreg3Q9CQV4 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Retreg3Q9CQV4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Retreg3Q9CQV4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retreg3Q9CQV4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retreg3Q9CQV4 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Retreg3Q9CQV4 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Retreg3Q9CQV4 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Retreg3Q9CQV4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.48■□□□□ 0.39
Retreg3Q9CQV4 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.48■□□□□ 0.39
Retreg3Q9CQV4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retreg3Q9CQV4 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Retreg3Q9CQV4 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Retreg3Q9CQV4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Retreg3Q9CQV4 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.48■□□□□ 0.39
Retreg3Q9CQV4 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.48■□□□□ 0.39
Retreg3Q9CQV4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Retreg3Q9CQV4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retreg3Q9CQV4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retreg3Q9CQV4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retreg3Q9CQV4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retreg3Q9CQV4 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.48■□□□□ 0.39
Retreg3Q9CQV4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retreg3Q9CQV4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retreg3Q9CQV4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retreg3Q9CQV4 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.47■□□□□ 0.39
Retreg3Q9CQV4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retreg3Q9CQV4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retreg3Q9CQV4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retreg3Q9CQV4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.47■□□□□ 0.39
Retreg3Q9CQV4 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Retreg3Q9CQV4 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retreg3Q9CQV4 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retreg3Q9CQV4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.47■□□□□ 0.39
Retreg3Q9CQV4 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retreg3Q9CQV4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retreg3Q9CQV4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retreg3Q9CQV4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retreg3Q9CQV4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retreg3Q9CQV4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retreg3Q9CQV4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retreg3Q9CQV4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Retreg3Q9CQV4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retreg3Q9CQV4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retreg3Q9CQV4 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retreg3Q9CQV4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retreg3Q9CQV4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retreg3Q9CQV4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retreg3Q9CQV4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retreg3Q9CQV4 Gm15565-201ENSMUST00000118890 427 ntBASIC17.46■□□□□ 0.39
Retreg3Q9CQV4 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retreg3Q9CQV4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.46■□□□□ 0.39
Retreg3Q9CQV4 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Retreg3Q9CQV4 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.46■□□□□ 0.39
Retreg3Q9CQV4 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.46■□□□□ 0.39
Retreg3Q9CQV4 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retreg3Q9CQV4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retreg3Q9CQV4 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.46■□□□□ 0.39
Retreg3Q9CQV4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Retreg3Q9CQV4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retreg3Q9CQV4 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Retreg3Q9CQV4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Retreg3Q9CQV4 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Retreg3Q9CQV4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retreg3Q9CQV4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retreg3Q9CQV4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retreg3Q9CQV4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retreg3Q9CQV4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retreg3Q9CQV4 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.45■□□□□ 0.38
Retreg3Q9CQV4 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retreg3Q9CQV4 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retreg3Q9CQV4 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retreg3Q9CQV4 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retreg3Q9CQV4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retreg3Q9CQV4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retreg3Q9CQV4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retreg3Q9CQV4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms