Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gtf2ird2Q99NI3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gtf2ird2Q99NI3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gtf2ird2Q99NI3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gtf2ird2Q99NI3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gtf2ird2Q99NI3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gtf2ird2Q99NI3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gtf2ird2Q99NI3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Gtf2ird2Q99NI3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf2ird2Q99NI3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Gtf2ird2Q99NI3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf2ird2Q99NI3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf2ird2Q99NI3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf2ird2Q99NI3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf2ird2Q99NI3 Gm15565-201ENSMUST00000118890 427 ntBASIC17.9■□□□□ 0.46
Gtf2ird2Q99NI3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.9■□□□□ 0.46
Gtf2ird2Q99NI3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf2ird2Q99NI3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.9■□□□□ 0.46
Gtf2ird2Q99NI3 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.9■□□□□ 0.46
Gtf2ird2Q99NI3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Gtf2ird2Q99NI3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf2ird2Q99NI3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf2ird2Q99NI3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf2ird2Q99NI3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Gtf2ird2Q99NI3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf2ird2Q99NI3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf2ird2Q99NI3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf2ird2Q99NI3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Gtf2ird2Q99NI3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Gtf2ird2Q99NI3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf2ird2Q99NI3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf2ird2Q99NI3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf2ird2Q99NI3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf2ird2Q99NI3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf2ird2Q99NI3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.89■□□□□ 0.45
Gtf2ird2Q99NI3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf2ird2Q99NI3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf2ird2Q99NI3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf2ird2Q99NI3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf2ird2Q99NI3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Gtf2ird2Q99NI3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.89■□□□□ 0.45
Gtf2ird2Q99NI3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.89■□□□□ 0.45
Gtf2ird2Q99NI3 Gm30025-201ENSMUST00000218555 728 ntBASIC17.89■□□□□ 0.45
Gtf2ird2Q99NI3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf2ird2Q99NI3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf2ird2Q99NI3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf2ird2Q99NI3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf2ird2Q99NI3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf2ird2Q99NI3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf2ird2Q99NI3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf2ird2Q99NI3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf2ird2Q99NI3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf2ird2Q99NI3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf2ird2Q99NI3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf2ird2Q99NI3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf2ird2Q99NI3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf2ird2Q99NI3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Gtf2ird2Q99NI3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf2ird2Q99NI3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf2ird2Q99NI3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf2ird2Q99NI3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf2ird2Q99NI3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Gtf2ird2Q99NI3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.88■□□□□ 0.45
Gtf2ird2Q99NI3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.88■□□□□ 0.45
Gtf2ird2Q99NI3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf2ird2Q99NI3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf2ird2Q99NI3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf2ird2Q99NI3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Gtf2ird2Q99NI3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf2ird2Q99NI3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Gtf2ird2Q99NI3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf2ird2Q99NI3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf2ird2Q99NI3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf2ird2Q99NI3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf2ird2Q99NI3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf2ird2Q99NI3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gtf2ird2Q99NI3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Gtf2ird2Q99NI3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.87■□□□□ 0.45
Gtf2ird2Q99NI3 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.87■□□□□ 0.45
Gtf2ird2Q99NI3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Gtf2ird2Q99NI3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.87■□□□□ 0.45
Gtf2ird2Q99NI3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gtf2ird2Q99NI3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Gtf2ird2Q99NI3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Gtf2ird2Q99NI3 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Gtf2ird2Q99NI3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.87■□□□□ 0.45
Gtf2ird2Q99NI3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.87■□□□□ 0.45
Gtf2ird2Q99NI3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gtf2ird2Q99NI3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gtf2ird2Q99NI3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Gtf2ird2Q99NI3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gtf2ird2Q99NI3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gtf2ird2Q99NI3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gtf2ird2Q99NI3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gtf2ird2Q99NI3 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gtf2ird2Q99NI3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.86■□□□□ 0.45
Gtf2ird2Q99NI3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.86■□□□□ 0.45
Gtf2ird2Q99NI3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gtf2ird2Q99NI3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Gtf2ird2Q99NI3 Gm12085-201ENSMUST00000119263 940 ntBASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms