Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Raf1Q99N57 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Raf1Q99N57 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.63■□□□□ 0.09
Raf1Q99N57 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Raf1Q99N57 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Raf1Q99N57 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Raf1Q99N57 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Raf1Q99N57 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.63■□□□□ 0.09
Raf1Q99N57 Gm6211-202ENSMUST00000167849 925 ntBASIC15.63■□□□□ 0.09
Raf1Q99N57 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Raf1Q99N57 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Raf1Q99N57 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Raf1Q99N57 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Raf1Q99N57 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Raf1Q99N57 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Raf1Q99N57 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Raf1Q99N57 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Raf1Q99N57 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Raf1Q99N57 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Raf1Q99N57 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Raf1Q99N57 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Raf1Q99N57 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Raf1Q99N57 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Raf1Q99N57 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.62■□□□□ 0.09
Raf1Q99N57 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Raf1Q99N57 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Raf1Q99N57 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Raf1Q99N57 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Raf1Q99N57 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.62■□□□□ 0.09
Raf1Q99N57 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Raf1Q99N57 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Raf1Q99N57 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Raf1Q99N57 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Raf1Q99N57 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Raf1Q99N57 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Raf1Q99N57 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Raf1Q99N57 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.62■□□□□ 0.09
Raf1Q99N57 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Raf1Q99N57 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Raf1Q99N57 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Raf1Q99N57 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Raf1Q99N57 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Raf1Q99N57 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Raf1Q99N57 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Raf1Q99N57 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Raf1Q99N57 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Raf1Q99N57 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Raf1Q99N57 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.61■□□□□ 0.09
Raf1Q99N57 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.61■□□□□ 0.09
Raf1Q99N57 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Raf1Q99N57 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Raf1Q99N57 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Raf1Q99N57 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Raf1Q99N57 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Raf1Q99N57 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Raf1Q99N57 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Raf1Q99N57 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Raf1Q99N57 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Raf1Q99N57 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raf1Q99N57 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Raf1Q99N57 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raf1Q99N57 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raf1Q99N57 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.6■□□□□ 0.09
Raf1Q99N57 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raf1Q99N57 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Raf1Q99N57 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raf1Q99N57 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raf1Q99N57 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raf1Q99N57 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raf1Q99N57 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raf1Q99N57 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raf1Q99N57 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raf1Q99N57 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raf1Q99N57 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raf1Q99N57 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raf1Q99N57 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Raf1Q99N57 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.59■□□□□ 0.09
Raf1Q99N57 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Raf1Q99N57 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Raf1Q99N57 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Raf1Q99N57 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Raf1Q99N57 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Raf1Q99N57 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Raf1Q99N57 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Raf1Q99N57 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.59■□□□□ 0.09
Raf1Q99N57 Idnk-204ENSMUST00000226010 1898 ntBASIC15.59■□□□□ 0.09
Raf1Q99N57 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Raf1Q99N57 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Raf1Q99N57 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.59■□□□□ 0.09
Raf1Q99N57 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Raf1Q99N57 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.59■□□□□ 0.09
Raf1Q99N57 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Raf1Q99N57 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Raf1Q99N57 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.59■□□□□ 0.09
Raf1Q99N57 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Raf1Q99N57 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.59■□□□□ 0.09
Raf1Q99N57 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.59■□□□□ 0.09
Raf1Q99N57 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.59■□□□□ 0.09
Raf1Q99N57 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Raf1Q99N57 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms