Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx6-1Q99MA9 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx6-1Q99MA9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Nkx6-1Q99MA9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.29■□□□□ 0.2
Nkx6-1Q99MA9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Nkx6-1Q99MA9 Gm5864-201ENSMUST00000202263 970 ntBASIC16.29■□□□□ 0.2
Nkx6-1Q99MA9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.29■□□□□ 0.2
Nkx6-1Q99MA9 Gm45328-201ENSMUST00000210942 917 ntBASIC16.29■□□□□ 0.2
Nkx6-1Q99MA9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx6-1Q99MA9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx6-1Q99MA9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx6-1Q99MA9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Nkx6-1Q99MA9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.29■□□□□ 0.2
Nkx6-1Q99MA9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx6-1Q99MA9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx6-1Q99MA9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx6-1Q99MA9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nkx6-1Q99MA9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx6-1Q99MA9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Nkx6-1Q99MA9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx6-1Q99MA9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx6-1Q99MA9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx6-1Q99MA9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx6-1Q99MA9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx6-1Q99MA9 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.28■□□□□ 0.2
Nkx6-1Q99MA9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx6-1Q99MA9 Gm37722-201ENSMUST00000193757 208 ntBASIC16.28■□□□□ 0.2
Nkx6-1Q99MA9 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.28■□□□□ 0.2
Nkx6-1Q99MA9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nkx6-1Q99MA9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx6-1Q99MA9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Nkx6-1Q99MA9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.27■□□□□ 0.2
Nkx6-1Q99MA9 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.27■□□□□ 0.2
Nkx6-1Q99MA9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx6-1Q99MA9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx6-1Q99MA9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nkx6-1Q99MA9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nkx6-1Q99MA9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.19
Nkx6-1Q99MA9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nkx6-1Q99MA9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nkx6-1Q99MA9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nkx6-1Q99MA9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Nkx6-1Q99MA9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Nkx6-1Q99MA9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nkx6-1Q99MA9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 Gm29791-202ENSMUST00000207888 369 ntBASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 Birc2-201ENSMUST00000054878 378 ntBASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Nkx6-1Q99MA9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx6-1Q99MA9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx6-1Q99MA9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx6-1Q99MA9 Olfr129-201ENSMUST00000122318 993 ntBASIC16.25■□□□□ 0.19
Nkx6-1Q99MA9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx6-1Q99MA9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx6-1Q99MA9 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.25■□□□□ 0.19
Nkx6-1Q99MA9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx6-1Q99MA9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx6-1Q99MA9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx6-1Q99MA9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx6-1Q99MA9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx6-1Q99MA9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx6-1Q99MA9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx6-1Q99MA9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx6-1Q99MA9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx6-1Q99MA9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx6-1Q99MA9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx6-1Q99MA9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx6-1Q99MA9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Nkx6-1Q99MA9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.24■□□□□ 0.19
Nkx6-1Q99MA9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Nkx6-1Q99MA9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.24■□□□□ 0.19
Nkx6-1Q99MA9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Nkx6-1Q99MA9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx6-1Q99MA9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms