Protein–RNA interactions for Protein: Q99J87

Dhx58, Probable ATP-dependent RNA helicase DHX58, mousemouse

Predictions only

Length 678 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx58Q99J87 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dhx58Q99J87 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dhx58Q99J87 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Dhx58Q99J87 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dhx58Q99J87 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dhx58Q99J87 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.26■□□□□ 0.51
Dhx58Q99J87 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Dhx58Q99J87 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dhx58Q99J87 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Dhx58Q99J87 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dhx58Q99J87 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.26■□□□□ 0.51
Dhx58Q99J87 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.26■□□□□ 0.51
Dhx58Q99J87 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dhx58Q99J87 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Dhx58Q99J87 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dhx58Q99J87 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dhx58Q99J87 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Dhx58Q99J87 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Dhx58Q99J87 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dhx58Q99J87 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Dhx58Q99J87 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.25■□□□□ 0.51
Dhx58Q99J87 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.25■□□□□ 0.51
Dhx58Q99J87 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Dhx58Q99J87 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Dhx58Q99J87 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.25■□□□□ 0.51
Dhx58Q99J87 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
Dhx58Q99J87 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.25■□□□□ 0.51
Dhx58Q99J87 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dhx58Q99J87 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Dhx58Q99J87 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dhx58Q99J87 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.25■□□□□ 0.51
Dhx58Q99J87 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Dhx58Q99J87 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Dhx58Q99J87 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Dhx58Q99J87 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.24■□□□□ 0.51
Dhx58Q99J87 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Dhx58Q99J87 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Dhx58Q99J87 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.24■□□□□ 0.51
Dhx58Q99J87 AV356131-201ENSMUST00000206201 750 ntBASIC18.24■□□□□ 0.51
Dhx58Q99J87 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.24■□□□□ 0.51
Dhx58Q99J87 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.24■□□□□ 0.51
Dhx58Q99J87 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.24■□□□□ 0.51
Dhx58Q99J87 Gm5874-201ENSMUST00000096101 508 ntBASIC18.24■□□□□ 0.51
Dhx58Q99J87 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.24■□□□□ 0.51
Dhx58Q99J87 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Dhx58Q99J87 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Dhx58Q99J87 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Dhx58Q99J87 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Dhx58Q99J87 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Dhx58Q99J87 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Dhx58Q99J87 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.23■□□□□ 0.51
Dhx58Q99J87 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Dhx58Q99J87 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Dhx58Q99J87 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Dhx58Q99J87 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Dhx58Q99J87 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Dhx58Q99J87 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Dhx58Q99J87 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Dhx58Q99J87 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Dhx58Q99J87 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Dhx58Q99J87 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Dhx58Q99J87 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Dhx58Q99J87 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Dhx58Q99J87 Gm6365-201ENSMUST00000054711 744 ntBASIC18.23■□□□□ 0.51
Dhx58Q99J87 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Dhx58Q99J87 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Dhx58Q99J87 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Dhx58Q99J87 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Dhx58Q99J87 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Dhx58Q99J87 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Dhx58Q99J87 Haglr-201ENSMUST00000100000 2085 ntBASIC18.22■□□□□ 0.51
Dhx58Q99J87 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.22■□□□□ 0.51
Dhx58Q99J87 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Dhx58Q99J87 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Dhx58Q99J87 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Dhx58Q99J87 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Dhx58Q99J87 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Dhx58Q99J87 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Dhx58Q99J87 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.22■□□□□ 0.51
Dhx58Q99J87 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Dhx58Q99J87 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
Dhx58Q99J87 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Dhx58Q99J87 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Dhx58Q99J87 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Dhx58Q99J87 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Dhx58Q99J87 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Dhx58Q99J87 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Dhx58Q99J87 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Dhx58Q99J87 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Dhx58Q99J87 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Dhx58Q99J87 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Dhx58Q99J87 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Dhx58Q99J87 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Dhx58Q99J87 Gm7291-201ENSMUST00000199147 382 ntBASIC18.21■□□□□ 0.51
Dhx58Q99J87 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.21■□□□□ 0.51
Dhx58Q99J87 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.21■□□□□ 0.51
Dhx58Q99J87 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Dhx58Q99J87 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Dhx58Q99J87 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Dhx58Q99J87 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms