Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Pcdha8Q91Y12 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Pcdha8Q91Y12 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha8Q91Y12 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha8Q91Y12 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha8Q91Y12 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.97■□□□□ 0.31
Pcdha8Q91Y12 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha8Q91Y12 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdha8Q91Y12 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha8Q91Y12 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha8Q91Y12 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha8Q91Y12 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha8Q91Y12 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha8Q91Y12 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha8Q91Y12 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Pcdha8Q91Y12 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Pcdha8Q91Y12 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha8Q91Y12 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.96■□□□□ 0.31
Pcdha8Q91Y12 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha8Q91Y12 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha8Q91Y12 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha8Q91Y12 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha8Q91Y12 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pcdha8Q91Y12 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pcdha8Q91Y12 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.95■□□□□ 0.3
Pcdha8Q91Y12 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha8Q91Y12 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha8Q91Y12 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha8Q91Y12 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha8Q91Y12 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha8Q91Y12 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha8Q91Y12 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.95■□□□□ 0.3
Pcdha8Q91Y12 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha8Q91Y12 Gm18666-201ENSMUST00000190039 958 ntBASIC16.95■□□□□ 0.3
Pcdha8Q91Y12 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha8Q91Y12 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha8Q91Y12 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha8Q91Y12 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha8Q91Y12 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha8Q91Y12 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.95■□□□□ 0.3
Pcdha8Q91Y12 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Pcdha8Q91Y12 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Pcdha8Q91Y12 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Pcdha8Q91Y12 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha8Q91Y12 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha8Q91Y12 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdha8Q91Y12 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha8Q91Y12 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.94■□□□□ 0.3
Pcdha8Q91Y12 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.94■□□□□ 0.3
Pcdha8Q91Y12 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha8Q91Y12 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha8Q91Y12 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha8Q91Y12 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha8Q91Y12 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha8Q91Y12 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.94■□□□□ 0.3
Pcdha8Q91Y12 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.94■□□□□ 0.3
Pcdha8Q91Y12 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha8Q91Y12 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha8Q91Y12 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.94■□□□□ 0.3
Pcdha8Q91Y12 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha8Q91Y12 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha8Q91Y12 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha8Q91Y12 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Pcdha8Q91Y12 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha8Q91Y12 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdha8Q91Y12 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha8Q91Y12 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha8Q91Y12 Gm11643-201ENSMUST00000119578 864 ntBASIC16.93■□□□□ 0.3
Pcdha8Q91Y12 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdha8Q91Y12 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.93■□□□□ 0.3
Pcdha8Q91Y12 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.93■□□□□ 0.3
Pcdha8Q91Y12 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha8Q91Y12 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha8Q91Y12 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdha8Q91Y12 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha8Q91Y12 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha8Q91Y12 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdha8Q91Y12 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha8Q91Y12 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha8Q91Y12 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha8Q91Y12 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha8Q91Y12 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha8Q91Y12 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha8Q91Y12 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdha8Q91Y12 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pcdha8Q91Y12 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.92■□□□□ 0.3
Pcdha8Q91Y12 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha8Q91Y12 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Pcdha8Q91Y12 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha8Q91Y12 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Pcdha8Q91Y12 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha8Q91Y12 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Pcdha8Q91Y12 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha8Q91Y12 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Pcdha8Q91Y12 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha8Q91Y12 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha8Q91Y12 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha8Q91Y12 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.92■□□□□ 0.3
Pcdha8Q91Y12 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdha8Q91Y12 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms