Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb1Q91Y08 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Pcdhb1Q91Y08 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb1Q91Y08 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdhb1Q91Y08 Gm15378-201ENSMUST00000121894 207 ntBASIC18.12■□□□□ 0.49
Pcdhb1Q91Y08 Gm10653-202ENSMUST00000139570 835 ntBASIC18.12■□□□□ 0.49
Pcdhb1Q91Y08 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb1Q91Y08 Gm20760-201ENSMUST00000179197 648 ntBASIC18.12■□□□□ 0.49
Pcdhb1Q91Y08 Gm43183-201ENSMUST00000200632 547 ntBASIC18.12■□□□□ 0.49
Pcdhb1Q91Y08 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Pcdhb1Q91Y08 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb1Q91Y08 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb1Q91Y08 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb1Q91Y08 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb1Q91Y08 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb1Q91Y08 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb1Q91Y08 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb1Q91Y08 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb1Q91Y08 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb1Q91Y08 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Pcdhb1Q91Y08 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.11■□□□□ 0.49
Pcdhb1Q91Y08 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Pcdhb1Q91Y08 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb1Q91Y08 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pcdhb1Q91Y08 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb1Q91Y08 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Pcdhb1Q91Y08 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb1Q91Y08 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb1Q91Y08 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb1Q91Y08 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb1Q91Y08 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb1Q91Y08 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb1Q91Y08 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.11■□□□□ 0.49
Pcdhb1Q91Y08 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb1Q91Y08 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pcdhb1Q91Y08 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb1Q91Y08 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb1Q91Y08 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb1Q91Y08 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb1Q91Y08 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb1Q91Y08 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb1Q91Y08 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb1Q91Y08 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.1■□□□□ 0.49
Pcdhb1Q91Y08 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Pcdhb1Q91Y08 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.1■□□□□ 0.49
Pcdhb1Q91Y08 Gm4974-201ENSMUST00000209974 875 ntBASIC18.1■□□□□ 0.49
Pcdhb1Q91Y08 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.1■□□□□ 0.49
Pcdhb1Q91Y08 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb1Q91Y08 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb1Q91Y08 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb1Q91Y08 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb1Q91Y08 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb1Q91Y08 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Pcdhb1Q91Y08 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb1Q91Y08 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb1Q91Y08 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb1Q91Y08 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb1Q91Y08 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.09■□□□□ 0.49
Pcdhb1Q91Y08 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb1Q91Y08 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.09■□□□□ 0.49
Pcdhb1Q91Y08 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb1Q91Y08 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb1Q91Y08 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb1Q91Y08 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb1Q91Y08 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb1Q91Y08 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb1Q91Y08 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb1Q91Y08 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb1Q91Y08 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Pcdhb1Q91Y08 Gm10698-201ENSMUST00000182663 604 ntBASIC18.08■□□□□ 0.48
Pcdhb1Q91Y08 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.08■□□□□ 0.48
Pcdhb1Q91Y08 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb1Q91Y08 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb1Q91Y08 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb1Q91Y08 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Pcdhb1Q91Y08 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb1Q91Y08 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb1Q91Y08 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb1Q91Y08 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb1Q91Y08 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb1Q91Y08 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhb1Q91Y08 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.07■□□□□ 0.48
Pcdhb1Q91Y08 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb1Q91Y08 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.07■□□□□ 0.48
Pcdhb1Q91Y08 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb1Q91Y08 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb1Q91Y08 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb1Q91Y08 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb1Q91Y08 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb1Q91Y08 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhb1Q91Y08 Gm10517-202ENSMUST00000192970 758 ntBASIC18.07■□□□□ 0.48
Pcdhb1Q91Y08 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.07■□□□□ 0.48
Pcdhb1Q91Y08 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.07■□□□□ 0.48
Pcdhb1Q91Y08 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb1Q91Y08 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb1Q91Y08 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb1Q91Y08 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb1Q91Y08 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb1Q91Y08 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb1Q91Y08 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms