Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb18Q91Y02 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb18Q91Y02 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb18Q91Y02 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb18Q91Y02 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Pcdhb18Q91Y02 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb18Q91Y02 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhb18Q91Y02 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb18Q91Y02 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb18Q91Y02 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb18Q91Y02 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb18Q91Y02 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb18Q91Y02 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhb18Q91Y02 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhb18Q91Y02 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb18Q91Y02 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb18Q91Y02 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhb18Q91Y02 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.19■□□□□ 0.5
Pcdhb18Q91Y02 Gm33142-201ENSMUST00000193913 867 ntBASIC18.19■□□□□ 0.5
Pcdhb18Q91Y02 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhb18Q91Y02 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb18Q91Y02 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb18Q91Y02 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb18Q91Y02 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb18Q91Y02 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb18Q91Y02 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb18Q91Y02 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.19■□□□□ 0.5
Pcdhb18Q91Y02 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb18Q91Y02 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb18Q91Y02 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb18Q91Y02 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb18Q91Y02 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb18Q91Y02 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb18Q91Y02 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb18Q91Y02 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Pcdhb18Q91Y02 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb18Q91Y02 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Pcdhb18Q91Y02 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Pcdhb18Q91Y02 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb18Q91Y02 Gm7638-201ENSMUST00000121348 967 ntBASIC18.18■□□□□ 0.5
Pcdhb18Q91Y02 Gm16061-201ENSMUST00000122167 857 ntBASIC18.18■□□□□ 0.5
Pcdhb18Q91Y02 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhb18Q91Y02 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb18Q91Y02 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb18Q91Y02 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdhb18Q91Y02 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb18Q91Y02 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb18Q91Y02 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb18Q91Y02 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb18Q91Y02 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb18Q91Y02 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb18Q91Y02 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb18Q91Y02 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb18Q91Y02 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb18Q91Y02 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb18Q91Y02 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb18Q91Y02 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb18Q91Y02 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.17■□□□□ 0.5
Pcdhb18Q91Y02 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb18Q91Y02 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb18Q91Y02 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb18Q91Y02 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb18Q91Y02 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb18Q91Y02 Gm24841-201ENSMUST00000158676 357 ntBASIC18.17■□□□□ 0.5
Pcdhb18Q91Y02 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.17■□□□□ 0.5
Pcdhb18Q91Y02 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhb18Q91Y02 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pcdhb18Q91Y02 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb18Q91Y02 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhb18Q91Y02 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb18Q91Y02 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb18Q91Y02 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb18Q91Y02 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb18Q91Y02 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb18Q91Y02 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdhb18Q91Y02 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb18Q91Y02 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb18Q91Y02 Tgds-204ENSMUST00000228543 1594 ntBASIC18.17■□□□□ 0.5
Pcdhb18Q91Y02 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb18Q91Y02 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb18Q91Y02 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb18Q91Y02 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb18Q91Y02 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.16■□□□□ 0.5
Pcdhb18Q91Y02 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb18Q91Y02 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.16■□□□□ 0.5
Pcdhb18Q91Y02 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Pcdhb18Q91Y02 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb18Q91Y02 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb18Q91Y02 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.16■□□□□ 0.5
Pcdhb18Q91Y02 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.16■□□□□ 0.5
Pcdhb18Q91Y02 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb18Q91Y02 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb18Q91Y02 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb18Q91Y02 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb18Q91Y02 Gm13401-201ENSMUST00000117074 291 ntBASIC18.15■□□□□ 0.5
Pcdhb18Q91Y02 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb18Q91Y02 Gm13474-201ENSMUST00000122466 815 ntBASIC18.15■□□□□ 0.5
Pcdhb18Q91Y02 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb18Q91Y02 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb18Q91Y02 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms