Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb3Q91XZ7 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb3Q91XZ7 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb3Q91XZ7 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.41■□□□□ 0.38
Pcdhb3Q91XZ7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Pcdhb3Q91XZ7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhb3Q91XZ7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb3Q91XZ7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb3Q91XZ7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhb3Q91XZ7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Pcdhb3Q91XZ7 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb3Q91XZ7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb3Q91XZ7 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb3Q91XZ7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb3Q91XZ7 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb3Q91XZ7 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhb3Q91XZ7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Pcdhb3Q91XZ7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdhb3Q91XZ7 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb3Q91XZ7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb3Q91XZ7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb3Q91XZ7 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb3Q91XZ7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb3Q91XZ7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Pcdhb3Q91XZ7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb3Q91XZ7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb3Q91XZ7 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Pcdhb3Q91XZ7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb3Q91XZ7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb3Q91XZ7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb3Q91XZ7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb3Q91XZ7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb3Q91XZ7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb3Q91XZ7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb3Q91XZ7 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb3Q91XZ7 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb3Q91XZ7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb3Q91XZ7 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb3Q91XZ7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhb3Q91XZ7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb3Q91XZ7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb3Q91XZ7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb3Q91XZ7 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb3Q91XZ7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb3Q91XZ7 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb3Q91XZ7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdhb3Q91XZ7 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.38■□□□□ 0.37
Pcdhb3Q91XZ7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdhb3Q91XZ7 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhb3Q91XZ7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.38■□□□□ 0.37
Pcdhb3Q91XZ7 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhb3Q91XZ7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb3Q91XZ7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb3Q91XZ7 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb3Q91XZ7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdhb3Q91XZ7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb3Q91XZ7 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb3Q91XZ7 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb3Q91XZ7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb3Q91XZ7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb3Q91XZ7 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb3Q91XZ7 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb3Q91XZ7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb3Q91XZ7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb3Q91XZ7 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb3Q91XZ7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.37■□□□□ 0.37
Pcdhb3Q91XZ7 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb3Q91XZ7 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb3Q91XZ7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb3Q91XZ7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Pcdhb3Q91XZ7 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb3Q91XZ7 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb3Q91XZ7 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb3Q91XZ7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb3Q91XZ7 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb3Q91XZ7 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb3Q91XZ7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb3Q91XZ7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb3Q91XZ7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhb3Q91XZ7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Pcdhb3Q91XZ7 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb3Q91XZ7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.36■□□□□ 0.37
Pcdhb3Q91XZ7 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhb3Q91XZ7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.36■□□□□ 0.37
Pcdhb3Q91XZ7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb3Q91XZ7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb3Q91XZ7 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb3Q91XZ7 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb3Q91XZ7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb3Q91XZ7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdhb3Q91XZ7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb3Q91XZ7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb3Q91XZ7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdhb3Q91XZ7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb3Q91XZ7 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb3Q91XZ7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb3Q91XZ7 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb3Q91XZ7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb3Q91XZ7 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb3Q91XZ7 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms