Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb8Q91XZ2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Pcdhb8Q91XZ2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb8Q91XZ2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb8Q91XZ2 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.02■□□□□ 0.31
Pcdhb8Q91XZ2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.02■□□□□ 0.31
Pcdhb8Q91XZ2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb8Q91XZ2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb8Q91XZ2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb8Q91XZ2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Pcdhb8Q91XZ2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhb8Q91XZ2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb8Q91XZ2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
Pcdhb8Q91XZ2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb8Q91XZ2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb8Q91XZ2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb8Q91XZ2 Gm11643-201ENSMUST00000119578 864 ntBASIC17.01■□□□□ 0.31
Pcdhb8Q91XZ2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb8Q91XZ2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.01■□□□□ 0.31
Pcdhb8Q91XZ2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhb8Q91XZ2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhb8Q91XZ2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdhb8Q91XZ2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb8Q91XZ2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb8Q91XZ2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb8Q91XZ2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb8Q91XZ2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb8Q91XZ2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb8Q91XZ2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17■□□□□ 0.31
Pcdhb8Q91XZ2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb8Q91XZ2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb8Q91XZ2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb8Q91XZ2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb8Q91XZ2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb8Q91XZ2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb8Q91XZ2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb8Q91XZ2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Pcdhb8Q91XZ2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb8Q91XZ2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb8Q91XZ2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb8Q91XZ2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb8Q91XZ2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Pcdhb8Q91XZ2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb8Q91XZ2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Pcdhb8Q91XZ2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb8Q91XZ2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Pcdhb8Q91XZ2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb8Q91XZ2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb8Q91XZ2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb8Q91XZ2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17■□□□□ 0.31
Pcdhb8Q91XZ2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb8Q91XZ2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb8Q91XZ2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pcdhb8Q91XZ2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhb8Q91XZ2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb8Q91XZ2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb8Q91XZ2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.99■□□□□ 0.31
Pcdhb8Q91XZ2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb8Q91XZ2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb8Q91XZ2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhb8Q91XZ2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhb8Q91XZ2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb8Q91XZ2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb8Q91XZ2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Pcdhb8Q91XZ2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb8Q91XZ2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdhb8Q91XZ2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.99■□□□□ 0.31
Pcdhb8Q91XZ2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Pcdhb8Q91XZ2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb8Q91XZ2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb8Q91XZ2 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb8Q91XZ2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb8Q91XZ2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb8Q91XZ2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb8Q91XZ2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Pcdhb8Q91XZ2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb8Q91XZ2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb8Q91XZ2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb8Q91XZ2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb8Q91XZ2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdhb8Q91XZ2 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.98■□□□□ 0.31
Pcdhb8Q91XZ2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Pcdhb8Q91XZ2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Pcdhb8Q91XZ2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhb8Q91XZ2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhb8Q91XZ2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb8Q91XZ2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb8Q91XZ2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb8Q91XZ2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb8Q91XZ2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb8Q91XZ2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb8Q91XZ2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Pcdhb8Q91XZ2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb8Q91XZ2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb8Q91XZ2 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.97■□□□□ 0.31
Pcdhb8Q91XZ2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb8Q91XZ2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb8Q91XZ2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.97■□□□□ 0.31
Pcdhb8Q91XZ2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pcdhb8Q91XZ2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms