Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Gm10653-202ENSMUST00000139570 835 ntBASIC16.82■□□□□ 0.28
Pcdhga11Q91XY8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga11Q91XY8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga11Q91XY8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga11Q91XY8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga11Q91XY8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga11Q91XY8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga11Q91XY8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga11Q91XY8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga11Q91XY8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga11Q91XY8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga11Q91XY8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga11Q91XY8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga11Q91XY8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga11Q91XY8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga11Q91XY8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga11Q91XY8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhga11Q91XY8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga11Q91XY8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga11Q91XY8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhga11Q91XY8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.81■□□□□ 0.28
Pcdhga11Q91XY8 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdhga11Q91XY8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdhga11Q91XY8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.81■□□□□ 0.28
Pcdhga11Q91XY8 Gm20760-201ENSMUST00000179197 648 ntBASIC16.81■□□□□ 0.28
Pcdhga11Q91XY8 Gm2559-201ENSMUST00000201323 363 ntBASIC16.81■□□□□ 0.28
Pcdhga11Q91XY8 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.81■□□□□ 0.28
Pcdhga11Q91XY8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pcdhga11Q91XY8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga11Q91XY8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga11Q91XY8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga11Q91XY8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga11Q91XY8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhga11Q91XY8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga11Q91XY8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga11Q91XY8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga11Q91XY8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga11Q91XY8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhga11Q91XY8 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.8■□□□□ 0.28
Pcdhga11Q91XY8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.8■□□□□ 0.28
Pcdhga11Q91XY8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdhga11Q91XY8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga11Q91XY8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga11Q91XY8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.8■□□□□ 0.28
Pcdhga11Q91XY8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga11Q91XY8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga11Q91XY8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga11Q91XY8 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga11Q91XY8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhga11Q91XY8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga11Q91XY8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga11Q91XY8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga11Q91XY8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga11Q91XY8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga11Q91XY8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhga11Q91XY8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.79■□□□□ 0.28
Pcdhga11Q91XY8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhga11Q91XY8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhga11Q91XY8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.79■□□□□ 0.28
Pcdhga11Q91XY8 Mir2861-201ENSMUST00000175539 82 ntBASIC16.79■□□□□ 0.28
Pcdhga11Q91XY8 Mir6349-201ENSMUST00000184059 97 ntBASIC16.79■□□□□ 0.28
Pcdhga11Q91XY8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.79■□□□□ 0.28
Pcdhga11Q91XY8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.79■□□□□ 0.28
Pcdhga11Q91XY8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga11Q91XY8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga11Q91XY8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhga11Q91XY8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhga11Q91XY8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhga11Q91XY8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga11Q91XY8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga11Q91XY8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga11Q91XY8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga11Q91XY8 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga11Q91XY8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga11Q91XY8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga11Q91XY8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga11Q91XY8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga11Q91XY8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga11Q91XY8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Pcdhga11Q91XY8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga11Q91XY8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga11Q91XY8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga11Q91XY8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhga11Q91XY8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Pcdhga11Q91XY8 Gm12527-201ENSMUST00000117967 564 ntBASIC16.78■□□□□ 0.28
Pcdhga11Q91XY8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Pcdhga11Q91XY8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga11Q91XY8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga11Q91XY8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga11Q91XY8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga11Q91XY8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga11Q91XY8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga11Q91XY8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhga11Q91XY8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga11Q91XY8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga11Q91XY8 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga11Q91XY8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga11Q91XY8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhga11Q91XY8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga11Q91XY8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms