Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.1■□□□□ 0.49
Pcdhgb1Q91XX8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb1Q91XX8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb1Q91XX8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb1Q91XX8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.1■□□□□ 0.49
Pcdhgb1Q91XX8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb1Q91XX8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb1Q91XX8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.1■□□□□ 0.49
Pcdhgb1Q91XX8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.1■□□□□ 0.49
Pcdhgb1Q91XX8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb1Q91XX8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Pcdhgb1Q91XX8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.1■□□□□ 0.49
Pcdhgb1Q91XX8 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdhgb1Q91XX8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pcdhgb1Q91XX8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pcdhgb1Q91XX8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb1Q91XX8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhgb1Q91XX8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhgb1Q91XX8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb1Q91XX8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb1Q91XX8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb1Q91XX8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb1Q91XX8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb1Q91XX8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb1Q91XX8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb1Q91XX8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb1Q91XX8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb1Q91XX8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb1Q91XX8 Gm10418-201ENSMUST00000100943 576 ntBASIC18.09■□□□□ 0.49
Pcdhgb1Q91XX8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb1Q91XX8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhgb1Q91XX8 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.09■□□□□ 0.49
Pcdhgb1Q91XX8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb1Q91XX8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb1Q91XX8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhgb1Q91XX8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhgb1Q91XX8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhgb1Q91XX8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhgb1Q91XX8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhgb1Q91XX8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhgb1Q91XX8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhgb1Q91XX8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhgb1Q91XX8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb1Q91XX8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Pcdhgb1Q91XX8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb1Q91XX8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb1Q91XX8 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.08■□□□□ 0.48
Pcdhgb1Q91XX8 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.08■□□□□ 0.48
Pcdhgb1Q91XX8 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.08■□□□□ 0.48
Pcdhgb1Q91XX8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Pcdhgb1Q91XX8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Pcdhgb1Q91XX8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb1Q91XX8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb1Q91XX8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb1Q91XX8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb1Q91XX8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb1Q91XX8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb1Q91XX8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb1Q91XX8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhgb1Q91XX8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb1Q91XX8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb1Q91XX8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb1Q91XX8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb1Q91XX8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb1Q91XX8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb1Q91XX8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.07■□□□□ 0.48
Pcdhgb1Q91XX8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb1Q91XX8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb1Q91XX8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb1Q91XX8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb1Q91XX8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb1Q91XX8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.07■□□□□ 0.48
Pcdhgb1Q91XX8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.07■□□□□ 0.48
Pcdhgb1Q91XX8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb1Q91XX8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb1Q91XX8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb1Q91XX8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb1Q91XX8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb1Q91XX8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhgb1Q91XX8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Pcdhgb1Q91XX8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb1Q91XX8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb1Q91XX8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb1Q91XX8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb1Q91XX8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb1Q91XX8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb1Q91XX8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb1Q91XX8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb1Q91XX8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb1Q91XX8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb1Q91XX8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb1Q91XX8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb1Q91XX8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdhgb1Q91XX8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Pcdhgb1Q91XX8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Pcdhgb1Q91XX8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb1Q91XX8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb1Q91XX8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhgb1Q91XX8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Pcdhgb1Q91XX8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms