Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb5Q91XX5 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb5Q91XX5 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb5Q91XX5 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb5Q91XX5 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb5Q91XX5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdhgb5Q91XX5 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb5Q91XX5 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhgb5Q91XX5 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb5Q91XX5 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhgb5Q91XX5 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb5Q91XX5 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb5Q91XX5 Il3ra-202ENSMUST00000223589 738 ntBASIC17.29■□□□□ 0.36
Pcdhgb5Q91XX5 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.29■□□□□ 0.36
Pcdhgb5Q91XX5 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb5Q91XX5 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhgb5Q91XX5 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb5Q91XX5 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb5Q91XX5 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb5Q91XX5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb5Q91XX5 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb5Q91XX5 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb5Q91XX5 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb5Q91XX5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb5Q91XX5 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.29■□□□□ 0.36
Pcdhgb5Q91XX5 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.28■□□□□ 0.36
Pcdhgb5Q91XX5 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhgb5Q91XX5 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb5Q91XX5 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb5Q91XX5 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb5Q91XX5 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhgb5Q91XX5 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb5Q91XX5 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb5Q91XX5 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb5Q91XX5 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb5Q91XX5 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.28■□□□□ 0.36
Pcdhgb5Q91XX5 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb5Q91XX5 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.28■□□□□ 0.36
Pcdhgb5Q91XX5 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb5Q91XX5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhgb5Q91XX5 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb5Q91XX5 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb5Q91XX5 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb5Q91XX5 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb5Q91XX5 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb5Q91XX5 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb5Q91XX5 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb5Q91XX5 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb5Q91XX5 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb5Q91XX5 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb5Q91XX5 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb5Q91XX5 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pcdhgb5Q91XX5 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb5Q91XX5 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb5Q91XX5 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb5Q91XX5 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb5Q91XX5 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhgb5Q91XX5 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhgb5Q91XX5 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhgb5Q91XX5 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb5Q91XX5 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb5Q91XX5 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb5Q91XX5 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb5Q91XX5 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Pcdhgb5Q91XX5 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb5Q91XX5 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.26■□□□□ 0.35
Pcdhgb5Q91XX5 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.26■□□□□ 0.35
Pcdhgb5Q91XX5 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.26■□□□□ 0.35
Pcdhgb5Q91XX5 Mir1668-201ENSMUST00000184114 107 ntBASIC17.26■□□□□ 0.35
Pcdhgb5Q91XX5 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.26■□□□□ 0.35
Pcdhgb5Q91XX5 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Pcdhgb5Q91XX5 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.26■□□□□ 0.35
Pcdhgb5Q91XX5 Gm21559-201ENSMUST00000220638 855 ntBASIC17.26■□□□□ 0.35
Pcdhgb5Q91XX5 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Pcdhgb5Q91XX5 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb5Q91XX5 Gm8587-201ENSMUST00000076538 843 ntBASIC17.26■□□□□ 0.35
Pcdhgb5Q91XX5 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb5Q91XX5 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb5Q91XX5 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb5Q91XX5 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb5Q91XX5 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb5Q91XX5 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.25■□□□□ 0.35
Pcdhgb5Q91XX5 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb5Q91XX5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Pcdhgb5Q91XX5 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Pcdhgb5Q91XX5 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Pcdhgb5Q91XX5 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pcdhgb5Q91XX5 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Pcdhgb5Q91XX5 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb5Q91XX5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb5Q91XX5 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb5Q91XX5 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Pcdhgb5Q91XX5 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.25■□□□□ 0.35
Pcdhgb5Q91XX5 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.25■□□□□ 0.35
Pcdhgb5Q91XX5 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb5Q91XX5 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb5Q91XX5 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb5Q91XX5 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhgb5Q91XX5 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Pcdhgb5Q91XX5 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms