Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhgc3Q91XX1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhgc3Q91XX1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhgc3Q91XX1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhgc3Q91XX1 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhgc3Q91XX1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.47■□□□□ 0.23
Pcdhgc3Q91XX1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhgc3Q91XX1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhgc3Q91XX1 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhgc3Q91XX1 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.47■□□□□ 0.23
Pcdhgc3Q91XX1 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhgc3Q91XX1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhgc3Q91XX1 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhgc3Q91XX1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdhgc3Q91XX1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhgc3Q91XX1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgc3Q91XX1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgc3Q91XX1 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Pcdhgc3Q91XX1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgc3Q91XX1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgc3Q91XX1 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgc3Q91XX1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Pcdhgc3Q91XX1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Pcdhgc3Q91XX1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.46■□□□□ 0.23
Pcdhgc3Q91XX1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgc3Q91XX1 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgc3Q91XX1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgc3Q91XX1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgc3Q91XX1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgc3Q91XX1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhgc3Q91XX1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgc3Q91XX1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pcdhgc3Q91XX1 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.45■□□□□ 0.22
Pcdhgc3Q91XX1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgc3Q91XX1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgc3Q91XX1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgc3Q91XX1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
Pcdhgc3Q91XX1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgc3Q91XX1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.45■□□□□ 0.22
Pcdhgc3Q91XX1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.45■□□□□ 0.22
Pcdhgc3Q91XX1 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.45■□□□□ 0.22
Pcdhgc3Q91XX1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.45■□□□□ 0.22
Pcdhgc3Q91XX1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgc3Q91XX1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdhgc3Q91XX1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgc3Q91XX1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgc3Q91XX1 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgc3Q91XX1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgc3Q91XX1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Pcdhgc3Q91XX1 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgc3Q91XX1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgc3Q91XX1 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhgc3Q91XX1 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhgc3Q91XX1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhgc3Q91XX1 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhgc3Q91XX1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhgc3Q91XX1 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhgc3Q91XX1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhgc3Q91XX1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Pcdhgc3Q91XX1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.44■□□□□ 0.22
Pcdhgc3Q91XX1 Gm15823-201ENSMUST00000064305 670 ntBASIC16.44■□□□□ 0.22
Pcdhgc3Q91XX1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhgc3Q91XX1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhgc3Q91XX1 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Pcdhgc3Q91XX1 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhgc3Q91XX1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgc3Q91XX1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgc3Q91XX1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhgc3Q91XX1 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Pcdhgc3Q91XX1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgc3Q91XX1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgc3Q91XX1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgc3Q91XX1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgc3Q91XX1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgc3Q91XX1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgc3Q91XX1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgc3Q91XX1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgc3Q91XX1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdhgc3Q91XX1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgc3Q91XX1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgc3Q91XX1 Gm9988-201ENSMUST00000069786 435 ntBASIC16.43■□□□□ 0.22
Pcdhgc3Q91XX1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgc3Q91XX1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.43■□□□□ 0.22
Pcdhgc3Q91XX1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhgc3Q91XX1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgc3Q91XX1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgc3Q91XX1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgc3Q91XX1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgc3Q91XX1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgc3Q91XX1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.43■□□□□ 0.22
Pcdhgc3Q91XX1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgc3Q91XX1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgc3Q91XX1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgc3Q91XX1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhgc3Q91XX1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhgc3Q91XX1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Pcdhgc3Q91XX1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhgc3Q91XX1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhgc3Q91XX1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhgc3Q91XX1 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms