Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx41Q91VN6 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx41Q91VN6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx41Q91VN6 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx41Q91VN6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx41Q91VN6 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx41Q91VN6 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx41Q91VN6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx41Q91VN6 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx41Q91VN6 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx41Q91VN6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx41Q91VN6 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx41Q91VN6 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ddx41Q91VN6 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx41Q91VN6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx41Q91VN6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx41Q91VN6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx41Q91VN6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ddx41Q91VN6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx41Q91VN6 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.95■□□□□ 0.78
Ddx41Q91VN6 Timm23-208ENSMUST00000226683 750 ntBASIC19.95■□□□□ 0.78
Ddx41Q91VN6 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx41Q91VN6 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx41Q91VN6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Ddx41Q91VN6 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx41Q91VN6 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ddx41Q91VN6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx41Q91VN6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx41Q91VN6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx41Q91VN6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx41Q91VN6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx41Q91VN6 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Ddx41Q91VN6 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx41Q91VN6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx41Q91VN6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx41Q91VN6 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx41Q91VN6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx41Q91VN6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.94■□□□□ 0.78
Ddx41Q91VN6 Gm30025-201ENSMUST00000218555 728 ntBASIC19.94■□□□□ 0.78
Ddx41Q91VN6 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.94■□□□□ 0.78
Ddx41Q91VN6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx41Q91VN6 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.94■□□□□ 0.78
Ddx41Q91VN6 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx41Q91VN6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx41Q91VN6 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx41Q91VN6 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.94■□□□□ 0.78
Ddx41Q91VN6 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx41Q91VN6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Ddx41Q91VN6 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.93■□□□□ 0.78
Ddx41Q91VN6 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx41Q91VN6 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx41Q91VN6 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx41Q91VN6 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx41Q91VN6 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx41Q91VN6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.93■□□□□ 0.78
Ddx41Q91VN6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx41Q91VN6 Gm3375-201ENSMUST00000203929 796 ntBASIC19.93■□□□□ 0.78
Ddx41Q91VN6 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.93■□□□□ 0.78
Ddx41Q91VN6 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.93■□□□□ 0.78
Ddx41Q91VN6 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx41Q91VN6 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.92■□□□□ 0.78
Ddx41Q91VN6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.92■□□□□ 0.78
Ddx41Q91VN6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx41Q91VN6 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx41Q91VN6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx41Q91VN6 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.92■□□□□ 0.78
Ddx41Q91VN6 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx41Q91VN6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx41Q91VN6 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Ddx41Q91VN6 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx41Q91VN6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx41Q91VN6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx41Q91VN6 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.92■□□□□ 0.78
Ddx41Q91VN6 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx41Q91VN6 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx41Q91VN6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx41Q91VN6 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx41Q91VN6 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Ddx41Q91VN6 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx41Q91VN6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx41Q91VN6 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx41Q91VN6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx41Q91VN6 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx41Q91VN6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.91■□□□□ 0.78
Ddx41Q91VN6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Ddx41Q91VN6 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx41Q91VN6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx41Q91VN6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx41Q91VN6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx41Q91VN6 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx41Q91VN6 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.91■□□□□ 0.78
Ddx41Q91VN6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx41Q91VN6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx41Q91VN6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx41Q91VN6 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx41Q91VN6 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Ddx41Q91VN6 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx41Q91VN6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx41Q91VN6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx41Q91VN6 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms