Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vsx1Q91V10 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Vsx1Q91V10 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vsx1Q91V10 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vsx1Q91V10 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Vsx1Q91V10 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vsx1Q91V10 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vsx1Q91V10 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vsx1Q91V10 Gm24589-201ENSMUST00000116692 94 ntBASIC17.22■□□□□ 0.35
Vsx1Q91V10 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vsx1Q91V10 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Vsx1Q91V10 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Vsx1Q91V10 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Vsx1Q91V10 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Vsx1Q91V10 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vsx1Q91V10 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Vsx1Q91V10 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Vsx1Q91V10 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vsx1Q91V10 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
Vsx1Q91V10 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vsx1Q91V10 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Vsx1Q91V10 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Vsx1Q91V10 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Vsx1Q91V10 Gm7638-201ENSMUST00000121348 967 ntBASIC17.21■□□□□ 0.35
Vsx1Q91V10 Gm18958-201ENSMUST00000174258 762 ntBASIC17.21■□□□□ 0.35
Vsx1Q91V10 Mir3081-201ENSMUST00000175305 84 ntBASIC17.21■□□□□ 0.35
Vsx1Q91V10 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vsx1Q91V10 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vsx1Q91V10 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.34
Vsx1Q91V10 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vsx1Q91V10 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vsx1Q91V10 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vsx1Q91V10 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vsx1Q91V10 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vsx1Q91V10 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vsx1Q91V10 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.2■□□□□ 0.34
Vsx1Q91V10 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vsx1Q91V10 Mir1668-201ENSMUST00000184114 107 ntBASIC17.2■□□□□ 0.34
Vsx1Q91V10 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.2■□□□□ 0.34
Vsx1Q91V10 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vsx1Q91V10 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vsx1Q91V10 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vsx1Q91V10 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vsx1Q91V10 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vsx1Q91V10 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vsx1Q91V10 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vsx1Q91V10 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vsx1Q91V10 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vsx1Q91V10 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vsx1Q91V10 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.2■□□□□ 0.34
Vsx1Q91V10 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Vsx1Q91V10 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vsx1Q91V10 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vsx1Q91V10 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vsx1Q91V10 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vsx1Q91V10 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vsx1Q91V10 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Vsx1Q91V10 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.19■□□□□ 0.34
Vsx1Q91V10 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.19■□□□□ 0.34
Vsx1Q91V10 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vsx1Q91V10 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vsx1Q91V10 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vsx1Q91V10 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vsx1Q91V10 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vsx1Q91V10 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vsx1Q91V10 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vsx1Q91V10 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vsx1Q91V10 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vsx1Q91V10 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vsx1Q91V10 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vsx1Q91V10 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.18■□□□□ 0.34
Vsx1Q91V10 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vsx1Q91V10 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vsx1Q91V10 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vsx1Q91V10 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vsx1Q91V10 Gm43514-201ENSMUST00000198852 424 ntBASIC17.18■□□□□ 0.34
Vsx1Q91V10 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vsx1Q91V10 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Vsx1Q91V10 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.18■□□□□ 0.34
Vsx1Q91V10 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vsx1Q91V10 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vsx1Q91V10 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.18■□□□□ 0.34
Vsx1Q91V10 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vsx1Q91V10 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Vsx1Q91V10 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vsx1Q91V10 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vsx1Q91V10 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Vsx1Q91V10 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vsx1Q91V10 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vsx1Q91V10 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vsx1Q91V10 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.17■□□□□ 0.34
Vsx1Q91V10 Gm18115-201ENSMUST00000221209 621 ntBASIC17.17■□□□□ 0.34
Vsx1Q91V10 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vsx1Q91V10 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vsx1Q91V10 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.16■□□□□ 0.34
Vsx1Q91V10 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Vsx1Q91V10 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Vsx1Q91V10 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Vsx1Q91V10 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vsx1Q91V10 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms