Protein–RNA interactions for Protein: Q8VIG3

Rsph1, Radial spoke head 1 homolog, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph1Q8VIG3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph1Q8VIG3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.2■□□□□ 0.5
Rsph1Q8VIG3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph1Q8VIG3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph1Q8VIG3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph1Q8VIG3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Rsph1Q8VIG3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph1Q8VIG3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph1Q8VIG3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph1Q8VIG3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Rsph1Q8VIG3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Rsph1Q8VIG3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph1Q8VIG3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.19■□□□□ 0.5
Rsph1Q8VIG3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph1Q8VIG3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph1Q8VIG3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph1Q8VIG3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph1Q8VIG3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rsph1Q8VIG3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph1Q8VIG3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph1Q8VIG3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph1Q8VIG3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Rsph1Q8VIG3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph1Q8VIG3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph1Q8VIG3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph1Q8VIG3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.18■□□□□ 0.5
Rsph1Q8VIG3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph1Q8VIG3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph1Q8VIG3 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph1Q8VIG3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph1Q8VIG3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph1Q8VIG3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph1Q8VIG3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rsph1Q8VIG3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rsph1Q8VIG3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rsph1Q8VIG3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rsph1Q8VIG3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Rsph1Q8VIG3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rsph1Q8VIG3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rsph1Q8VIG3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rsph1Q8VIG3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.17■□□□□ 0.5
Rsph1Q8VIG3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rsph1Q8VIG3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rsph1Q8VIG3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rsph1Q8VIG3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.17■□□□□ 0.5
Rsph1Q8VIG3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rsph1Q8VIG3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rsph1Q8VIG3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rsph1Q8VIG3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Rsph1Q8VIG3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rsph1Q8VIG3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rsph1Q8VIG3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rsph1Q8VIG3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.16■□□□□ 0.5
Rsph1Q8VIG3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rsph1Q8VIG3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rsph1Q8VIG3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.16■□□□□ 0.5
Rsph1Q8VIG3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rsph1Q8VIG3 Gm26039-201ENSMUST00000158152 144 ntBASIC18.16■□□□□ 0.5
Rsph1Q8VIG3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.16■□□□□ 0.5
Rsph1Q8VIG3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rsph1Q8VIG3 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.16■□□□□ 0.5
Rsph1Q8VIG3 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.16■□□□□ 0.5
Rsph1Q8VIG3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rsph1Q8VIG3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rsph1Q8VIG3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rsph1Q8VIG3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.16■□□□□ 0.5
Rsph1Q8VIG3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rsph1Q8VIG3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.16■□□□□ 0.5
Rsph1Q8VIG3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rsph1Q8VIG3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rsph1Q8VIG3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rsph1Q8VIG3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rsph1Q8VIG3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rsph1Q8VIG3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rsph1Q8VIG3 Gm9103-201ENSMUST00000119371 405 ntBASIC18.15■□□□□ 0.5
Rsph1Q8VIG3 Gm7284-201ENSMUST00000131667 944 ntBASIC18.15■□□□□ 0.5
Rsph1Q8VIG3 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rsph1Q8VIG3 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.15■□□□□ 0.5
Rsph1Q8VIG3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rsph1Q8VIG3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rsph1Q8VIG3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rsph1Q8VIG3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rsph1Q8VIG3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rsph1Q8VIG3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rsph1Q8VIG3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rsph1Q8VIG3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rsph1Q8VIG3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.5
Rsph1Q8VIG3 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rsph1Q8VIG3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rsph1Q8VIG3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rsph1Q8VIG3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.14■□□□□ 0.49
Rsph1Q8VIG3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.14■□□□□ 0.49
Rsph1Q8VIG3 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.14■□□□□ 0.49
Rsph1Q8VIG3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.14■□□□□ 0.49
Rsph1Q8VIG3 Gm29518-201ENSMUST00000190858 372 ntBASIC18.14■□□□□ 0.49
Rsph1Q8VIG3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Rsph1Q8VIG3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.14■□□□□ 0.49
Rsph1Q8VIG3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rsph1Q8VIG3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rsph1Q8VIG3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms