Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rpa1Q8VEE4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rpa1Q8VEE4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rpa1Q8VEE4 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rpa1Q8VEE4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rpa1Q8VEE4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rpa1Q8VEE4 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Rpa1Q8VEE4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpa1Q8VEE4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpa1Q8VEE4 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpa1Q8VEE4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpa1Q8VEE4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rpa1Q8VEE4 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpa1Q8VEE4 Gm9988-201ENSMUST00000069786 435 ntBASIC17.56■□□□□ 0.4
Rpa1Q8VEE4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rpa1Q8VEE4 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.56■□□□□ 0.4
Rpa1Q8VEE4 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Rpa1Q8VEE4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpa1Q8VEE4 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpa1Q8VEE4 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.56■□□□□ 0.4
Rpa1Q8VEE4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpa1Q8VEE4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpa1Q8VEE4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpa1Q8VEE4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpa1Q8VEE4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpa1Q8VEE4 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rpa1Q8VEE4 Reep4-203ENSMUST00000226563 1444 ntBASIC17.55■□□□□ 0.4
Rpa1Q8VEE4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.55■□□□□ 0.4
Rpa1Q8VEE4 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpa1Q8VEE4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Rpa1Q8VEE4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rpa1Q8VEE4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpa1Q8VEE4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Rpa1Q8VEE4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpa1Q8VEE4 Gm43060-201ENSMUST00000200621 289 ntBASIC17.55■□□□□ 0.4
Rpa1Q8VEE4 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.55■□□□□ 0.4
Rpa1Q8VEE4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpa1Q8VEE4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Rpa1Q8VEE4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpa1Q8VEE4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Rpa1Q8VEE4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpa1Q8VEE4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.55■□□□□ 0.4
Rpa1Q8VEE4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpa1Q8VEE4 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rpa1Q8VEE4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpa1Q8VEE4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rpa1Q8VEE4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpa1Q8VEE4 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpa1Q8VEE4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Rpa1Q8VEE4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.54■□□□□ 0.4
Rpa1Q8VEE4 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpa1Q8VEE4 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpa1Q8VEE4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpa1Q8VEE4 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.54■□□□□ 0.4
Rpa1Q8VEE4 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.54■□□□□ 0.4
Rpa1Q8VEE4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpa1Q8VEE4 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.54■□□□□ 0.4
Rpa1Q8VEE4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rpa1Q8VEE4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpa1Q8VEE4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Rpa1Q8VEE4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rpa1Q8VEE4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.54■□□□□ 0.4
Rpa1Q8VEE4 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Rpa1Q8VEE4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpa1Q8VEE4 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpa1Q8VEE4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rpa1Q8VEE4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpa1Q8VEE4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpa1Q8VEE4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpa1Q8VEE4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rpa1Q8VEE4 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpa1Q8VEE4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpa1Q8VEE4 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpa1Q8VEE4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpa1Q8VEE4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpa1Q8VEE4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rpa1Q8VEE4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpa1Q8VEE4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rpa1Q8VEE4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpa1Q8VEE4 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpa1Q8VEE4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rpa1Q8VEE4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.53■□□□□ 0.4
Rpa1Q8VEE4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Rpa1Q8VEE4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rpa1Q8VEE4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Rpa1Q8VEE4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.53■□□□□ 0.4
Rpa1Q8VEE4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpa1Q8VEE4 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rpa1Q8VEE4 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpa1Q8VEE4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpa1Q8VEE4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.52■□□□□ 0.4
Rpa1Q8VEE4 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpa1Q8VEE4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.52■□□□□ 0.4
Rpa1Q8VEE4 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpa1Q8VEE4 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpa1Q8VEE4 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rpa1Q8VEE4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.52■□□□□ 0.39
Rpa1Q8VEE4 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rpa1Q8VEE4 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.52■□□□□ 0.39
Rpa1Q8VEE4 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms