Protein–RNA interactions for Protein: Q8VC66

Ssx2ip, Afadin- and alpha-actinin-binding protein, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ipQ8VC66 Gm12896-201ENSMUST00000118430 226 ntBASIC17.89■□□□□ 0.45
Ssx2ipQ8VC66 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ssx2ipQ8VC66 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ssx2ipQ8VC66 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.89■□□□□ 0.45
Ssx2ipQ8VC66 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ssx2ipQ8VC66 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ssx2ipQ8VC66 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ssx2ipQ8VC66 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ssx2ipQ8VC66 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ssx2ipQ8VC66 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ssx2ipQ8VC66 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ssx2ipQ8VC66 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ssx2ipQ8VC66 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ssx2ipQ8VC66 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ssx2ipQ8VC66 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.88■□□□□ 0.45
Ssx2ipQ8VC66 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ssx2ipQ8VC66 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ssx2ipQ8VC66 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ssx2ipQ8VC66 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ssx2ipQ8VC66 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Ssx2ipQ8VC66 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ssx2ipQ8VC66 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ssx2ipQ8VC66 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Ssx2ipQ8VC66 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ssx2ipQ8VC66 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ssx2ipQ8VC66 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ssx2ipQ8VC66 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ssx2ipQ8VC66 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Ssx2ipQ8VC66 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ssx2ipQ8VC66 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ssx2ipQ8VC66 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ssx2ipQ8VC66 Gm11927-201ENSMUST00000118472 759 ntBASIC17.87■□□□□ 0.45
Ssx2ipQ8VC66 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.87■□□□□ 0.45
Ssx2ipQ8VC66 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ssx2ipQ8VC66 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.87■□□□□ 0.45
Ssx2ipQ8VC66 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ssx2ipQ8VC66 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ssx2ipQ8VC66 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ssx2ipQ8VC66 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ssx2ipQ8VC66 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ssx2ipQ8VC66 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ssx2ipQ8VC66 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ssx2ipQ8VC66 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ssx2ipQ8VC66 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ssx2ipQ8VC66 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ssx2ipQ8VC66 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ssx2ipQ8VC66 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ssx2ipQ8VC66 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ssx2ipQ8VC66 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ssx2ipQ8VC66 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ssx2ipQ8VC66 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.86■□□□□ 0.45
Ssx2ipQ8VC66 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.86■□□□□ 0.45
Ssx2ipQ8VC66 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ssx2ipQ8VC66 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ssx2ipQ8VC66 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ssx2ipQ8VC66 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ssx2ipQ8VC66 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ssx2ipQ8VC66 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.86■□□□□ 0.45
Ssx2ipQ8VC66 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
Ssx2ipQ8VC66 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Ssx2ipQ8VC66 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Ssx2ipQ8VC66 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ssx2ipQ8VC66 Tgds-204ENSMUST00000228543 1594 ntBASIC17.86■□□□□ 0.45
Ssx2ipQ8VC66 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ssx2ipQ8VC66 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ssx2ipQ8VC66 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ssx2ipQ8VC66 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ssx2ipQ8VC66 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ssx2ipQ8VC66 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ssx2ipQ8VC66 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssx2ipQ8VC66 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.85■□□□□ 0.45
Ssx2ipQ8VC66 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssx2ipQ8VC66 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.85■□□□□ 0.45
Ssx2ipQ8VC66 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssx2ipQ8VC66 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ssx2ipQ8VC66 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssx2ipQ8VC66 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssx2ipQ8VC66 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssx2ipQ8VC66 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssx2ipQ8VC66 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ssx2ipQ8VC66 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Ssx2ipQ8VC66 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ssx2ipQ8VC66 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ssx2ipQ8VC66 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ssx2ipQ8VC66 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.84■□□□□ 0.45
Ssx2ipQ8VC66 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.84■□□□□ 0.45
Ssx2ipQ8VC66 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ssx2ipQ8VC66 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ssx2ipQ8VC66 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.84■□□□□ 0.45
Ssx2ipQ8VC66 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ssx2ipQ8VC66 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ssx2ipQ8VC66 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ssx2ipQ8VC66 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ssx2ipQ8VC66 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ssx2ipQ8VC66 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.84■□□□□ 0.45
Ssx2ipQ8VC66 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.84■□□□□ 0.45
Ssx2ipQ8VC66 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ssx2ipQ8VC66 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ssx2ipQ8VC66 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ssx2ipQ8VC66 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms