Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.86■□□□□ 0.93
Top1mtQ8R4U6 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Top1mtQ8R4U6 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.86■□□□□ 0.93
Top1mtQ8R4U6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Top1mtQ8R4U6 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Top1mtQ8R4U6 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.86■□□□□ 0.93
Top1mtQ8R4U6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Top1mtQ8R4U6 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Top1mtQ8R4U6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Top1mtQ8R4U6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Top1mtQ8R4U6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Top1mtQ8R4U6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Top1mtQ8R4U6 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Top1mtQ8R4U6 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Top1mtQ8R4U6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Top1mtQ8R4U6 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.85■□□□□ 0.93
Top1mtQ8R4U6 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Top1mtQ8R4U6 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Top1mtQ8R4U6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Top1mtQ8R4U6 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Top1mtQ8R4U6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Top1mtQ8R4U6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Top1mtQ8R4U6 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.84■□□□□ 0.93
Top1mtQ8R4U6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Top1mtQ8R4U6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Top1mtQ8R4U6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Top1mtQ8R4U6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.84■□□□□ 0.93
Top1mtQ8R4U6 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Top1mtQ8R4U6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Top1mtQ8R4U6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Top1mtQ8R4U6 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Top1mtQ8R4U6 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Top1mtQ8R4U6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Top1mtQ8R4U6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Top1mtQ8R4U6 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Top1mtQ8R4U6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Top1mtQ8R4U6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Top1mtQ8R4U6 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Top1mtQ8R4U6 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Top1mtQ8R4U6 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Top1mtQ8R4U6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Top1mtQ8R4U6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Top1mtQ8R4U6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.82■□□□□ 0.92
Top1mtQ8R4U6 Gm13168-201ENSMUST00000121771 632 ntBASIC20.82■□□□□ 0.92
Top1mtQ8R4U6 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Top1mtQ8R4U6 Gm10517-202ENSMUST00000192970 758 ntBASIC20.82■□□□□ 0.92
Top1mtQ8R4U6 Gm4974-201ENSMUST00000209974 875 ntBASIC20.82■□□□□ 0.92
Top1mtQ8R4U6 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Top1mtQ8R4U6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Top1mtQ8R4U6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Top1mtQ8R4U6 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.81■□□□□ 0.92
Top1mtQ8R4U6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Top1mtQ8R4U6 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Top1mtQ8R4U6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Top1mtQ8R4U6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Top1mtQ8R4U6 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Top1mtQ8R4U6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Top1mtQ8R4U6 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Top1mtQ8R4U6 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Top1mtQ8R4U6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Top1mtQ8R4U6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Top1mtQ8R4U6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Top1mtQ8R4U6 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.81■□□□□ 0.92
Top1mtQ8R4U6 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Top1mtQ8R4U6 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.81■□□□□ 0.92
Top1mtQ8R4U6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Top1mtQ8R4U6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.81■□□□□ 0.92
Top1mtQ8R4U6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Top1mtQ8R4U6 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Top1mtQ8R4U6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Top1mtQ8R4U6 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Top1mtQ8R4U6 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.8■□□□□ 0.92
Top1mtQ8R4U6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.8■□□□□ 0.92
Top1mtQ8R4U6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Top1mtQ8R4U6 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.8■□□□□ 0.92
Top1mtQ8R4U6 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Top1mtQ8R4U6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Top1mtQ8R4U6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Top1mtQ8R4U6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Top1mtQ8R4U6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Top1mtQ8R4U6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.79■□□□□ 0.92
Top1mtQ8R4U6 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Top1mtQ8R4U6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Top1mtQ8R4U6 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Top1mtQ8R4U6 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Top1mtQ8R4U6 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Top1mtQ8R4U6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Top1mtQ8R4U6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Top1mtQ8R4U6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Top1mtQ8R4U6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.79■□□□□ 0.92
Top1mtQ8R4U6 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Top1mtQ8R4U6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Top1mtQ8R4U6 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Top1mtQ8R4U6 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.78■□□□□ 0.92
Top1mtQ8R4U6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Top1mtQ8R4U6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Top1mtQ8R4U6 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Top1mtQ8R4U6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Top1mtQ8R4U6 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Top1mtQ8R4U6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms