Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tmc1Q8R4P5 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Tmc1Q8R4P5 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Tmc1Q8R4P5 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tmc1Q8R4P5 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Tmc1Q8R4P5 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.34■■□□□ 1.01
Tmc1Q8R4P5 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tmc1Q8R4P5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tmc1Q8R4P5 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tmc1Q8R4P5 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Tmc1Q8R4P5 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
Tmc1Q8R4P5 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tmc1Q8R4P5 Gm12527-201ENSMUST00000117967 564 ntBASIC21.33■■□□□ 1.01
Tmc1Q8R4P5 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
Tmc1Q8R4P5 Gm29791-202ENSMUST00000207888 369 ntBASIC21.33■■□□□ 1.01
Tmc1Q8R4P5 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.33■■□□□ 1.01
Tmc1Q8R4P5 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tmc1Q8R4P5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Tmc1Q8R4P5 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Tmc1Q8R4P5 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tmc1Q8R4P5 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC21.32■■□□□ 1
Tmc1Q8R4P5 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Tmc1Q8R4P5 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tmc1Q8R4P5 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.32■■□□□ 1
Tmc1Q8R4P5 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tmc1Q8R4P5 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tmc1Q8R4P5 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tmc1Q8R4P5 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.32■■□□□ 1
Tmc1Q8R4P5 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tmc1Q8R4P5 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tmc1Q8R4P5 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tmc1Q8R4P5 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tmc1Q8R4P5 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tmc1Q8R4P5 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tmc1Q8R4P5 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tmc1Q8R4P5 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tmc1Q8R4P5 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC21.31■■□□□ 1
Tmc1Q8R4P5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tmc1Q8R4P5 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tmc1Q8R4P5 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tmc1Q8R4P5 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tmc1Q8R4P5 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Tmc1Q8R4P5 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.31■■□□□ 1
Tmc1Q8R4P5 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tmc1Q8R4P5 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tmc1Q8R4P5 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.31■■□□□ 1
Tmc1Q8R4P5 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tmc1Q8R4P5 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tmc1Q8R4P5 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tmc1Q8R4P5 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tmc1Q8R4P5 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tmc1Q8R4P5 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tmc1Q8R4P5 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tmc1Q8R4P5 Gm8839-201ENSMUST00000121279 1645 ntBASIC21.3■■□□□ 1
Tmc1Q8R4P5 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Tmc1Q8R4P5 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.3■■□□□ 1
Tmc1Q8R4P5 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tmc1Q8R4P5 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tmc1Q8R4P5 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Tmc1Q8R4P5 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tmc1Q8R4P5 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tmc1Q8R4P5 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Tmc1Q8R4P5 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Tmc1Q8R4P5 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.29■■□□□ 1
Tmc1Q8R4P5 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.29■■□□□ 1
Tmc1Q8R4P5 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.29■■□□□ 1
Tmc1Q8R4P5 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Tmc1Q8R4P5 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Tmc1Q8R4P5 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tmc1Q8R4P5 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tmc1Q8R4P5 Gm11620-201ENSMUST00000118770 1845 ntBASIC21.29■■□□□ 1
Tmc1Q8R4P5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Tmc1Q8R4P5 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tmc1Q8R4P5 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tmc1Q8R4P5 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tmc1Q8R4P5 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.28■■□□□ 1
Tmc1Q8R4P5 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tmc1Q8R4P5 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Tmc1Q8R4P5 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tmc1Q8R4P5 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Tmc1Q8R4P5 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tmc1Q8R4P5 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Tmc1Q8R4P5 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tmc1Q8R4P5 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Tmc1Q8R4P5 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tmc1Q8R4P5 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tmc1Q8R4P5 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC21.27■■□□□ 1
Tmc1Q8R4P5 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tmc1Q8R4P5 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tmc1Q8R4P5 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Tmc1Q8R4P5 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Tmc1Q8R4P5 Gm10418-201ENSMUST00000100943 576 ntBASIC21.27■■□□□ 1
Tmc1Q8R4P5 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.27■■□□□ 1
Tmc1Q8R4P5 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.27■■□□□ 1
Tmc1Q8R4P5 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.27■■□□□ 1
Tmc1Q8R4P5 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Tmc1Q8R4P5 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Tmc1Q8R4P5 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tmc1Q8R4P5 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Tmc1Q8R4P5 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms