Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cuedc1Q8R3V6 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cuedc1Q8R3V6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cuedc1Q8R3V6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cuedc1Q8R3V6 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.82■□□□□ 0.12
Cuedc1Q8R3V6 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cuedc1Q8R3V6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cuedc1Q8R3V6 Gm10013-201ENSMUST00000106074 672 ntBASIC15.82■□□□□ 0.12
Cuedc1Q8R3V6 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.82■□□□□ 0.12
Cuedc1Q8R3V6 Gm23634-201ENSMUST00000175071 91 ntBASIC15.82■□□□□ 0.12
Cuedc1Q8R3V6 Gm42545-201ENSMUST00000202755 922 ntBASIC15.82■□□□□ 0.12
Cuedc1Q8R3V6 Gm18959-201ENSMUST00000208954 655 ntBASIC15.82■□□□□ 0.12
Cuedc1Q8R3V6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cuedc1Q8R3V6 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cuedc1Q8R3V6 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Cuedc1Q8R3V6 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cuedc1Q8R3V6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cuedc1Q8R3V6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cuedc1Q8R3V6 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cuedc1Q8R3V6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Cuedc1Q8R3V6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cuedc1Q8R3V6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cuedc1Q8R3V6 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cuedc1Q8R3V6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Cuedc1Q8R3V6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cuedc1Q8R3V6 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cuedc1Q8R3V6 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cuedc1Q8R3V6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cuedc1Q8R3V6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Cuedc1Q8R3V6 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.81■□□□□ 0.12
Cuedc1Q8R3V6 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cuedc1Q8R3V6 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cuedc1Q8R3V6 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.81■□□□□ 0.12
Cuedc1Q8R3V6 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.81■□□□□ 0.12
Cuedc1Q8R3V6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cuedc1Q8R3V6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cuedc1Q8R3V6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cuedc1Q8R3V6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cuedc1Q8R3V6 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cuedc1Q8R3V6 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cuedc1Q8R3V6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cuedc1Q8R3V6 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cuedc1Q8R3V6 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cuedc1Q8R3V6 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cuedc1Q8R3V6 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cuedc1Q8R3V6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cuedc1Q8R3V6 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cuedc1Q8R3V6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.8■□□□□ 0.12
Cuedc1Q8R3V6 Gm12382-201ENSMUST00000122005 922 ntBASIC15.8■□□□□ 0.12
Cuedc1Q8R3V6 Gm37292-201ENSMUST00000192062 758 ntBASIC15.8■□□□□ 0.12
Cuedc1Q8R3V6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.8■□□□□ 0.12
Cuedc1Q8R3V6 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cuedc1Q8R3V6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cuedc1Q8R3V6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cuedc1Q8R3V6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cuedc1Q8R3V6 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cuedc1Q8R3V6 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cuedc1Q8R3V6 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.79■□□□□ 0.12
Cuedc1Q8R3V6 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cuedc1Q8R3V6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cuedc1Q8R3V6 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cuedc1Q8R3V6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cuedc1Q8R3V6 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cuedc1Q8R3V6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cuedc1Q8R3V6 AA414768-201ENSMUST00000121924 1257 ntBASIC15.79■□□□□ 0.12
Cuedc1Q8R3V6 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cuedc1Q8R3V6 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cuedc1Q8R3V6 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.79■□□□□ 0.12
Cuedc1Q8R3V6 Mir6349-201ENSMUST00000184059 97 ntBASIC15.79■□□□□ 0.12
Cuedc1Q8R3V6 Gm33142-201ENSMUST00000193913 867 ntBASIC15.79■□□□□ 0.12
Cuedc1Q8R3V6 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.79■□□□□ 0.12
Cuedc1Q8R3V6 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.79■□□□□ 0.12
Cuedc1Q8R3V6 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cuedc1Q8R3V6 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Cuedc1Q8R3V6 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cuedc1Q8R3V6 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.79■□□□□ 0.12
Cuedc1Q8R3V6 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Cuedc1Q8R3V6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cuedc1Q8R3V6 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cuedc1Q8R3V6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cuedc1Q8R3V6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.79■□□□□ 0.12
Cuedc1Q8R3V6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cuedc1Q8R3V6 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cuedc1Q8R3V6 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cuedc1Q8R3V6 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cuedc1Q8R3V6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cuedc1Q8R3V6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cuedc1Q8R3V6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cuedc1Q8R3V6 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.78■□□□□ 0.12
Cuedc1Q8R3V6 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cuedc1Q8R3V6 Fst-202ENSMUST00000223640 2612 ntBASIC15.78■□□□□ 0.12
Cuedc1Q8R3V6 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cuedc1Q8R3V6 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.78■□□□□ 0.12
Cuedc1Q8R3V6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.78■□□□□ 0.12
Cuedc1Q8R3V6 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cuedc1Q8R3V6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cuedc1Q8R3V6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cuedc1Q8R3V6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Cuedc1Q8R3V6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Cuedc1Q8R3V6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms