Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Gm10493-201ENSMUST00000097270 612 ntBASIC17.62■□□□□ 0.41
Slf1Q8R3P9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slf1Q8R3P9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slf1Q8R3P9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slf1Q8R3P9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.62■□□□□ 0.41
Slf1Q8R3P9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slf1Q8R3P9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slf1Q8R3P9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slf1Q8R3P9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Slf1Q8R3P9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slf1Q8R3P9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slf1Q8R3P9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slf1Q8R3P9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slf1Q8R3P9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slf1Q8R3P9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Slf1Q8R3P9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Slf1Q8R3P9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.61■□□□□ 0.41
Slf1Q8R3P9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Slf1Q8R3P9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.61■□□□□ 0.41
Slf1Q8R3P9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Slf1Q8R3P9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Slf1Q8R3P9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.61■□□□□ 0.41
Slf1Q8R3P9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slf1Q8R3P9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slf1Q8R3P9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slf1Q8R3P9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slf1Q8R3P9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slf1Q8R3P9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slf1Q8R3P9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slf1Q8R3P9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slf1Q8R3P9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Slf1Q8R3P9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slf1Q8R3P9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Slf1Q8R3P9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Slf1Q8R3P9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slf1Q8R3P9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slf1Q8R3P9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slf1Q8R3P9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slf1Q8R3P9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slf1Q8R3P9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slf1Q8R3P9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Slf1Q8R3P9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Slf1Q8R3P9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slf1Q8R3P9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slf1Q8R3P9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slf1Q8R3P9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slf1Q8R3P9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slf1Q8R3P9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slf1Q8R3P9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slf1Q8R3P9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.59■□□□□ 0.41
Slf1Q8R3P9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slf1Q8R3P9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slf1Q8R3P9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slf1Q8R3P9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slf1Q8R3P9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.59■□□□□ 0.41
Slf1Q8R3P9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Slf1Q8R3P9 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.59■□□□□ 0.41
Slf1Q8R3P9 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.59■□□□□ 0.41
Slf1Q8R3P9 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.59■□□□□ 0.41
Slf1Q8R3P9 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.59■□□□□ 0.41
Slf1Q8R3P9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slf1Q8R3P9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slf1Q8R3P9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Slf1Q8R3P9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slf1Q8R3P9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Slf1Q8R3P9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Slf1Q8R3P9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slf1Q8R3P9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slf1Q8R3P9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slf1Q8R3P9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Slf1Q8R3P9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Slf1Q8R3P9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slf1Q8R3P9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slf1Q8R3P9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slf1Q8R3P9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Slf1Q8R3P9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slf1Q8R3P9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Slf1Q8R3P9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slf1Q8R3P9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slf1Q8R3P9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Slf1Q8R3P9 Gm42778-201ENSMUST00000199644 553 ntBASIC17.58■□□□□ 0.4
Slf1Q8R3P9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slf1Q8R3P9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slf1Q8R3P9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slf1Q8R3P9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slf1Q8R3P9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slf1Q8R3P9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Slf1Q8R3P9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slf1Q8R3P9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
Slf1Q8R3P9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slf1Q8R3P9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slf1Q8R3P9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slf1Q8R3P9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slf1Q8R3P9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slf1Q8R3P9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slf1Q8R3P9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slf1Q8R3P9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slf1Q8R3P9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.57■□□□□ 0.4
Slf1Q8R3P9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slf1Q8R3P9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms