Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ubqln1Q8R317 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.52■□□□□ 0.24
Ubqln1Q8R317 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.52■□□□□ 0.24
Ubqln1Q8R317 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.52■□□□□ 0.23
Ubqln1Q8R317 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ubqln1Q8R317 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Ubqln1Q8R317 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubqln1Q8R317 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ubqln1Q8R317 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.51■□□□□ 0.23
Ubqln1Q8R317 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.51■□□□□ 0.23
Ubqln1Q8R317 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ubqln1Q8R317 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.51■□□□□ 0.23
Ubqln1Q8R317 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ubqln1Q8R317 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubqln1Q8R317 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Ubqln1Q8R317 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubqln1Q8R317 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubqln1Q8R317 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubqln1Q8R317 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ubqln1Q8R317 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubqln1Q8R317 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubqln1Q8R317 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubqln1Q8R317 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ubqln1Q8R317 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubqln1Q8R317 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubqln1Q8R317 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ubqln1Q8R317 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubqln1Q8R317 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ubqln1Q8R317 Gm22240-201ENSMUST00000175225 82 ntBASIC16.5■□□□□ 0.23
Ubqln1Q8R317 Gm42545-201ENSMUST00000202755 922 ntBASIC16.5■□□□□ 0.23
Ubqln1Q8R317 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Ubqln1Q8R317 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubqln1Q8R317 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubqln1Q8R317 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ubqln1Q8R317 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubqln1Q8R317 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubqln1Q8R317 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubqln1Q8R317 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubqln1Q8R317 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Ubqln1Q8R317 Gm13401-201ENSMUST00000117074 291 ntBASIC16.49■□□□□ 0.23
Ubqln1Q8R317 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubqln1Q8R317 Gm6576-201ENSMUST00000169678 883 ntBASIC16.49■□□□□ 0.23
Ubqln1Q8R317 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ubqln1Q8R317 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubqln1Q8R317 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubqln1Q8R317 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubqln1Q8R317 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubqln1Q8R317 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubqln1Q8R317 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ubqln1Q8R317 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Ubqln1Q8R317 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ubqln1Q8R317 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ubqln1Q8R317 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubqln1Q8R317 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.48■□□□□ 0.23
Ubqln1Q8R317 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ubqln1Q8R317 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ubqln1Q8R317 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
Ubqln1Q8R317 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Ubqln1Q8R317 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.48■□□□□ 0.23
Ubqln1Q8R317 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ubqln1Q8R317 Mir8112-201ENSMUST00000184382 131 ntBASIC16.48■□□□□ 0.23
Ubqln1Q8R317 Gm8520-201ENSMUST00000186517 868 ntBASIC16.48■□□□□ 0.23
Ubqln1Q8R317 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.48■□□□□ 0.23
Ubqln1Q8R317 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ubqln1Q8R317 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubqln1Q8R317 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubqln1Q8R317 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ubqln1Q8R317 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubqln1Q8R317 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubqln1Q8R317 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ubqln1Q8R317 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ubqln1Q8R317 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.47■□□□□ 0.23
Ubqln1Q8R317 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.47■□□□□ 0.23
Ubqln1Q8R317 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.47■□□□□ 0.23
Ubqln1Q8R317 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubqln1Q8R317 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubqln1Q8R317 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubqln1Q8R317 Gm13168-201ENSMUST00000121771 632 ntBASIC16.47■□□□□ 0.23
Ubqln1Q8R317 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Ubqln1Q8R317 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubqln1Q8R317 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubqln1Q8R317 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Ubqln1Q8R317 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubqln1Q8R317 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubqln1Q8R317 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.47■□□□□ 0.23
Ubqln1Q8R317 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubqln1Q8R317 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubqln1Q8R317 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.47■□□□□ 0.23
Ubqln1Q8R317 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubqln1Q8R317 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubqln1Q8R317 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ubqln1Q8R317 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubqln1Q8R317 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ubqln1Q8R317 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ubqln1Q8R317 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubqln1Q8R317 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.46■□□□□ 0.23
Ubqln1Q8R317 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Ubqln1Q8R317 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ubqln1Q8R317 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ubqln1Q8R317 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms