Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zcchc9Q8R1J3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zcchc9Q8R1J3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zcchc9Q8R1J3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zcchc9Q8R1J3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zcchc9Q8R1J3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Zcchc9Q8R1J3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zcchc9Q8R1J3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Zcchc9Q8R1J3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.37■□□□□ 0.37
Zcchc9Q8R1J3 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zcchc9Q8R1J3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Zcchc9Q8R1J3 Gm10013-201ENSMUST00000106074 672 ntBASIC17.36■□□□□ 0.37
Zcchc9Q8R1J3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zcchc9Q8R1J3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Zcchc9Q8R1J3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.36■□□□□ 0.37
Zcchc9Q8R1J3 Gm45058-201ENSMUST00000205810 766 ntBASIC17.36■□□□□ 0.37
Zcchc9Q8R1J3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.36■□□□□ 0.37
Zcchc9Q8R1J3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zcchc9Q8R1J3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Zcchc9Q8R1J3 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zcchc9Q8R1J3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Zcchc9Q8R1J3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Zcchc9Q8R1J3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Zcchc9Q8R1J3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
Zcchc9Q8R1J3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Zcchc9Q8R1J3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Zcchc9Q8R1J3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Zcchc9Q8R1J3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Zcchc9Q8R1J3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zcchc9Q8R1J3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zcchc9Q8R1J3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zcchc9Q8R1J3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zcchc9Q8R1J3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zcchc9Q8R1J3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zcchc9Q8R1J3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Zcchc9Q8R1J3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Zcchc9Q8R1J3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Zcchc9Q8R1J3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Zcchc9Q8R1J3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zcchc9Q8R1J3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zcchc9Q8R1J3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.34■□□□□ 0.37
Zcchc9Q8R1J3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.34■□□□□ 0.37
Zcchc9Q8R1J3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Zcchc9Q8R1J3 Gm18032-201ENSMUST00000222541 538 ntBASIC17.34■□□□□ 0.37
Zcchc9Q8R1J3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.34■□□□□ 0.37
Zcchc9Q8R1J3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zcchc9Q8R1J3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zcchc9Q8R1J3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zcchc9Q8R1J3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Zcchc9Q8R1J3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Zcchc9Q8R1J3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Zcchc9Q8R1J3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.33■□□□□ 0.37
Zcchc9Q8R1J3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Zcchc9Q8R1J3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Zcchc9Q8R1J3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Zcchc9Q8R1J3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Zcchc9Q8R1J3 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.33■□□□□ 0.37
Zcchc9Q8R1J3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Zcchc9Q8R1J3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Zcchc9Q8R1J3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Zcchc9Q8R1J3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.33■□□□□ 0.37
Zcchc9Q8R1J3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Zcchc9Q8R1J3 Mir5130-201ENSMUST00000175160 84 ntBASIC17.33■□□□□ 0.36
Zcchc9Q8R1J3 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.33■□□□□ 0.36
Zcchc9Q8R1J3 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.33■□□□□ 0.36
Zcchc9Q8R1J3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.33■□□□□ 0.36
Zcchc9Q8R1J3 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Zcchc9Q8R1J3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Zcchc9Q8R1J3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Zcchc9Q8R1J3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Zcchc9Q8R1J3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Zcchc9Q8R1J3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Zcchc9Q8R1J3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Zcchc9Q8R1J3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Zcchc9Q8R1J3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zcchc9Q8R1J3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zcchc9Q8R1J3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zcchc9Q8R1J3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zcchc9Q8R1J3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Zcchc9Q8R1J3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zcchc9Q8R1J3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zcchc9Q8R1J3 AA414768-201ENSMUST00000121924 1257 ntBASIC17.32■□□□□ 0.36
Zcchc9Q8R1J3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.32■□□□□ 0.36
Zcchc9Q8R1J3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Zcchc9Q8R1J3 Gm38027-201ENSMUST00000192315 235 ntBASIC17.32■□□□□ 0.36
Zcchc9Q8R1J3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.32■□□□□ 0.36
Zcchc9Q8R1J3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Zcchc9Q8R1J3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zcchc9Q8R1J3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zcchc9Q8R1J3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zcchc9Q8R1J3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zcchc9Q8R1J3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zcchc9Q8R1J3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zcchc9Q8R1J3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zcchc9Q8R1J3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Zcchc9Q8R1J3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Zcchc9Q8R1J3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Zcchc9Q8R1J3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Zcchc9Q8R1J3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Zcchc9Q8R1J3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms